Poeciliopsis prolifica (blackstripe livebearer): 129365360
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Entry
129365360 CDS
T09758
Name
(RefSeq) thrombospondin-1-like
KO
K16857
thrombospondin 1
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl04115
p53 signaling pathway
pprl04145
Phagosome
pprl04148
Efferocytosis
pprl04350
TGF-beta signaling pathway
pprl04510
Focal adhesion
pprl04512
ECM-receptor interaction
pprl04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
129365360
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
129365360
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
129365360
04148 Efferocytosis
129365360
09143 Cell growth and death
04115 p53 signaling pathway
129365360
09144 Cellular community - eukaryotes
04510 Focal adhesion
129365360
09142 Cell motility
04820 Cytoskeleton in muscle cells
129365360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pprl04131
]
129365360
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pprl00536
]
129365360
Membrane trafficking [BR:
pprl04131
]
Endocytosis
Phagocytosis
Opsonins
129365360
Glycosaminoglycan binding proteins [BR:
pprl00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
129365360
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSP_C
TSP_3
TSP_1
TSP1_spondin
VWC
TSP1_ADAMTS
EGF_3
TSP1_CFP_C
EGF_CA
cEGF
EGF
TSP1_CCN
Motif
Other DBs
NCBI-GeneID:
129365360
NCBI-ProteinID:
XP_054894501
LinkDB
All DBs
Position
Unknown
AA seq
1172 aa
AA seq
DB search
MMLCGIFFLLILWSCDGARLAESRDDNSVYDLFELARVSKRHNGVSLVKGADPYSPAYKV
LNADLIPPVPDASFRDLLDSIQAERGFLLLLNLKQSKKTRGSLLTVEKTDGSGPIFEIIS
NGKANTLDLVYSTERQLQVVSIEDAGLANGHWRNLTLFIQEDRAQLFVGCEEINVSELDV
PIQTLLSRELADRARLRIGKGAVKDKFMGVLQNVHFVFGTSLDAILTNKGCKSGAALTQM
MTLDNPVNGSSPAIRTDYTGHKSKDLQTVCGFSCEDITSMFKELRGLNVIVKQLSNELQK
VSTDSELLKNQIIIHNGVCIHNGIVHKDKDEWTVDGCTECTCQNSATICRKISCPIIPCA
NATVPDGECCPRCGTPSDFPEGGWSAWSDWTHCSVSCGRGIQQRGRSCDRINSKCEGTSV
QTRDCYPQECDKRFKQDGGWSHWSPWSSCSVTCGEGVMTQIRLCNSPTPQMGGRDCQGEG
RHTKVCQMSPCPINGEWGPWSPWDTCSATCGGGVQTRNRLCNDPMPKYGGKDCIGDATMI
QICNKQDCPIDGCLSNPCFPGTKCTSFRDGSFECGKCPLGYIGDGITCTDIDECKEVPDA
CHTHNGIHRCENTEPGYNCLPCPSRFSGPQPFGRGVEQATAKKQVCTPRNPCKDGSHNCH
KNANCIYLGVYSESMFRCECKPGYAGNGRICGEDSDLDGWPNTDLLCVENATYHCKKDNC
PNLPNSGQEDHDKDGLGDECDHDDDNDGIPDDRDNCPRVYNPAQYDADRDDVGDRCDNCV
FEANTDQTDTDNNGEGDACAVDIDGDGILNENDNCPYVYNVDQRDTDRDGVGDHCDNCPL
EHNPDQVDSDSDRIGDKCDNNQDIDEDGHQNNLDNCPYIPNANQADHDKDGKGDACDHDD
DNDGIPDDKDNCRLAYNPDQVDSDGDGRGDICKDDFDQDNVLDIHDVCPENFAISETDFR
RFQMVPLDPKGTSQIDPNWVVRHQGKELVQTVNCDPGIAVGYDEFSAVDFSGTFFINTDR
DDDYAGFVFGYQSSSRFYTVMWKQITQTYWSHTPTRAQGYSGLSIKVVNSTTGPGEHLRN
ALWHTGDTAGQVRTLWHDPKNIGWKDFTAYRWHLTHRPKTGLIRVIMYEGKRIMADSGNI
YDKTYAGGRLGLYVFSQEMVYFSDLKYECRDT
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
atgatgctgtgtggcatcttttttctgctgattctttggagttgcgatggtgccagattg
gcagagagtcgcgatgataacagtgtgtatgacctatttgagctggcgagggtgagcaaa
cgacacaacggagtgagtctggtcaaaggcgcagacccttacagtcccgcatacaaggtc
ctgaatgcggacctgatccccccggtccccgacgcctccttcagggacctcctcgattcc
atccaggccgagcggggattcctcctattactgaacctaaagcagtccaaaaagacgaga
ggcagcctgctgacagtcgagaagaccgacggatctggccccatcttcgagatcatttct
aacgggaaggcgaacactctcgatctggtctactccaccgagaggcagctgcaggtggtg
tccatcgaagatgccggcttggccaatgggcactggaggaacctcacgctgttcatccag
gaggacagggcacagctttttgtaggctgtgaagagatcaacgtgtcagagctggatgtg
ccaatccaaactttactgtccagggagttggcagatagagccagactcaggattggaaaa
ggggcagtgaaggacaagtttatgggagtcctccagaatgtccattttgtctttgggacc
tctctagatgccattctgaccaataagggatgtaaaagtggagctgctttaacccaaatg
atgaccctggacaacccagtcaatggttccagtcctgccattagaaccgattatactggc
cataaatccaaagatctgcagactgtctgcggtttctcatgtgaggatattaccagtatg
tttaaggagctcaggggactcaatgtgattgttaagcagctgtcaaatgaactccaaaaa
gtgtctactgatagtgagttactgaagaatcagatcatcatccacaatggagtctgcatc
cataacggcattgtgcacaaggacaaagatgaatggacagtggatggctgcacagagtgc
acctgtcagaactctgcaaccatatgtcgtaaaatctcctgtcctatcatcccctgcgcc
aatgctactgtgcccgatggagaatgctgcccacgctgtggaacaccaagtgactttccc
gagggtggttggtctgcctggtctgactggacccattgttctgtgagttgtggtcgtgga
atccagcagcgtggacgctcctgtgaccgcatcaacagcaagtgtgagggcacctctgtc
cagacccgtgactgctacccgcaggaatgcgacaagcgcttcaagcaggatggaggctgg
agccactggtcaccctggtcttcatgctctgtgacctgtggtgaaggggtcatgacacag
atccgtctctgcaactcccccacaccacagatgggtggcagagactgccaaggagaagga
cgtcacaccaaagtttgccaaatgtcgccctgtcctattaatggagaatggggaccttgg
tcaccatgggatacctgctctgcaacctgtggtggaggagtccaaacaagaaaccgtctc
tgcaatgacccaatgcctaaatacggaggaaaagattgtattggtgatgctaccatgatt
caaatctgcaacaaacaagactgccctatcgatggttgcctttccaacccatgtttccct
ggtacaaagtgcactagcttccgtgatggctcatttgagtgtggcaagtgcccacttggc
tacattggtgatgggattacctgcacagacattgatgaatgcaaagaggtcccagatgct
tgccatactcacaatggaattcatcgttgtgagaacacagagccaggttacaactgcctc
ccctgtccttcccgtttctctggtccccaaccttttggaagaggtgtggaacaggcaact
gctaaaaaacaggtgtgcactccccgcaacccttgcaaggatggtagccacaactgccat
aaaaatgcgaactgcatatatttgggcgtctactctgagtcgatgttccgctgtgaatgc
aagccaggatatgctgggaatggccggatttgtggagaggacagtgatctagatggatgg
cctaacactgatctgctgtgtgtggagaacgccacttatcactgcaaaaaggataactgc
cccaaccttcccaactctggccaggaagaccatgacaaagatggccttggggatgaatgt
gaccatgatgatgacaatgatggaattcccgatgatagggacaactgtccaagagtgtac
aaccctgcccagtatgatgcagacagggacgatgttggtgaccgatgtgacaactgtgtg
tttgaggctaatactgaccaaacagacacagacaacaacggcgagggagatgcctgtgct
gtcgacattgatggtgatggtattctgaatgagaacgacaactgcccatatgtgtacaat
gttgaccagagagatacagacagggatggtgttggagatcactgtgataactgtcccctc
gagcacaacccagaccaggttgactctgactcagatcgtattggagacaagtgcgataac
aaccaggacattgacgaggacggtcaccagaacaacttggataactgcccatacattccc
aatgctaaccaggccgaccatgacaaagatggcaaaggtgatgcttgcgaccatgatgac
gacaatgacggcattcctgatgataaagacaactgccgattggcttataatcccgatcaa
gtggactctgacggtgatggtcgtggagatatttgcaaggatgattttgaccaagacaat
gtcctggacatccatgatgtttgccctgagaactttgccatcagtgaaacagacttccgc
agattccaaatggttcccttggatcccaaaggcacatctcagattgaccccaactgggtg
gtgaggcatcaaggcaaggagctggtgcagactgtcaactgcgatcccggcattgctgtt
ggttacgatgagttcagtgccgtggatttcagtggaacgtttttcatcaacacggacaga
gatgatgactatgctgggtttgtgtttggctaccagtccagctcccgcttctacacagtg
atgtggaaacagatcacacagacttactggtcccacacacccacgagagctcaaggctac
tctggcttgtcaatcaaagttgtaaattccaccacagggcctggcgaacacctcagaaat
gctctgtggcacactggagacaccgcaggacaggtccgtactctgtggcatgaccccaag
aacatcggctggaaggactttactgcctatagatggcacctaacccacagacccaagact
ggacttattagagtcatcatgtatgaaggcaagagaatcatggcggattctggaaacatt
tacgataagacatatgctggtgggcgactaggcttgtatgtcttctctcaggagatggtt
tacttctcagacctcaaatatgaatgtagagatacataa
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