Poeciliopsis prolifica (blackstripe livebearer): 129366457
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Entry
129366457 CDS
T09758
Symbol
traf2b
Name
(RefSeq) TNF receptor-associated factor 2 isoform X1
KO
K03173
TNF receptor-associated factor 2 [EC:
2.3.2.27
]
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl04010
MAPK signaling pathway
pprl04137
Mitophagy - animal
pprl04141
Protein processing in endoplasmic reticulum
pprl04210
Apoptosis
pprl04217
Necroptosis
pprl04621
NOD-like receptor signaling pathway
pprl04622
RIG-I-like receptor signaling pathway
pprl04920
Adipocytokine signaling pathway
pprl05132
Salmonella infection
pprl05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
129366457 (traf2b)
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
129366457 (traf2b)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
129366457 (traf2b)
09143 Cell growth and death
04210 Apoptosis
129366457 (traf2b)
04217 Necroptosis
129366457 (traf2b)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
129366457 (traf2b)
04622 RIG-I-like receptor signaling pathway
129366457 (traf2b)
09152 Endocrine system
04920 Adipocytokine signaling pathway
129366457 (traf2b)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
129366457 (traf2b)
09171 Infectious disease: bacterial
05132 Salmonella infection
129366457 (traf2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pprl03019
]
129366457 (traf2b)
04121 Ubiquitin system [BR:
pprl04121
]
129366457 (traf2b)
Enzymes [BR:
pprl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129366457 (traf2b)
Messenger RNA biogenesis [BR:
pprl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
129366457 (traf2b)
Ubiquitin system [BR:
pprl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
129366457 (traf2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
TRAF_BIRC3_bd
zf-TRAF
TRAF2_zf
TRAF3_RING
zf-C3HC4
zf-C3HC4_4
zf-RING_5
zf-C3HC4_2
zf-C3HC4_3
zf-RING_6
zf-RING_2
TRAFD1-XIAF1_ZnF
Paramyxo_NS_C
ATG16
Sina_ZnF
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
129366457
NCBI-ProteinID:
XP_054896292
LinkDB
All DBs
Position
Unknown
AA seq
517 aa
AA seq
DB search
MMARISLDSQNSLPGIPLSVLSVPMENKYKCQQCLQVLRKPVQAQCGHRFCVHCFKLLTS
AGPKPCEACRQEEIYEEPMSILNGNEAFPDNAAGREIASLPARCLNQSCSWTGSIKEYEA
QHEGRCEYERVQCEACQASILLKDKDRHNERECEARTLNCKYCKVTFNFKDIKAHDEICL
KFPLQCKDCGKKKIPREKFSDHIKSCVKSKSACPFSEVGCKTVIENGKLSDHEHSSTMEH
LRLLLPMVLTMTHPRREALGSGELQEDSGLGLYRAPEEGDGGAAAAQPVDLEKKVIALEN
IVCVLNREVERSSLTLEAFAHQHRLDQEKIENLSNRVRQLERTVTMRDLQLSETEQLVRE
LQNCTYDGIFVWKITDFSRRRQEAVAGRTPAMFSPAFYSSKYGYKMCLRLYLNGDGTGRG
THLSLFFVVMKGKCDALLKWPFSQKVTLMLLDQNNREHIIDAFRPDISSTSFQRPISEMN
IASGCPLFCPLAKLAGKSPYLRDDTIFIKAIVDLTGL
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgatggctcgcatctctttggactctcaaaactctttaccaggaattcctttgagtgtg
ctgtctgtgcccatggagaataagtacaaatgtcagcagtgtctccaggtcctgaggaaa
cctgtccaggctcagtgtggccaccgcttctgtgtgcactgcttcaagctgctcaccagc
gccggtccaaagccttgtgaagcctgccgccaagaggagatctatgaagagcccatgtcc
atcctgaacggtaatgaggcgtttccagacaacgcagccggtcgagaaatagcgagtctg
cctgccaggtgtttgaaccagagctgcagctggactggatctataaaagagtacgaggct
cagcatgaaggccgctgtgaatacgaacgggtgcagtgcgaggcctgccaggcctccatc
ctcctcaaggacaaggacagacacaacgagagagaatgtgaggcgagaactctcaactgc
aaatattgcaaagtcaccttcaactttaaagacattaaggcccacgacgagatctgtctg
aagtttcccttacaatgtaaagattgcggcaagaagaagatccccagagaaaagttcagt
gaccacatcaaatcctgtgtcaagtcgaagagcgcctgtccattcagcgaagtgggctgt
aaaactgtgatagagaacgggaagctgagcgaccatgagcacagcagcaccatggagcac
ctgcgtctgctgctgccgatggtcctgacgatgacccatccgcgaagggaggccctcgga
tccggggagctgcaggaggactcgggtctgggtctgtacagagctcctgaggagggagac
ggaggtgcagccgccgcacagcctgtagacctggaaaaaaaagtaattgctttagaaaac
attgtgtgtgtcctgaaccgggaagtggagcgcagttccctcaccctggaggctttcgcc
caccagcatcgactagaccaggagaaaattgaaaacttgtcgaacagggtgcggcagctc
gagcgaacggtgaccatgagagacctgcagctgtcggagaccgagcagctggtgcgcgag
cttcagaactgcacctacgacgggatattcgtctggaaaatcaccgacttctcccggcgc
agacaggaggccgtggccggccgaacgcctgccatgttctcacctgcattttactccagc
aaatacggctacaaaatgtgtctcaggctttatttgaacggcgacgggaccggacggggg
acgcacctctccctgttctttgtggtcatgaagggaaagtgcgacgctctgctgaagtgg
cccttcagtcaaaaggtgactctgatgctcctggatcagaacaacagggagcacatcatc
gacgccttccgacccgacatctcctccacctccttccagcggccgatcagcgagatgaac
atcgccagcggctgcccgctcttctgcccgctggctaagctggccggcaagagcccatat
ttgagagatgatacgatatttatcaaagcaatcgtagacctcacaggcttgtga
DBGET
integrated database retrieval system
