Poeciliopsis prolifica (blackstripe livebearer): 129367803
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Entry
129367803 CDS
T09758
Symbol
tdg.1
Name
(RefSeq) thymine DNA glycosylase, tandem duplicate 1 isoform X1
KO
K20813
thymine-DNA glycosylase [EC:
3.2.2.29
]
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
129367803 (tdg.1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pprl03400
]
129367803 (tdg.1)
Enzymes [BR:
pprl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.29 thymine-DNA glycosylase
129367803 (tdg.1)
DNA repair and recombination proteins [BR:
pprl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
129367803 (tdg.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Ribosomal_L19e
Motif
Other DBs
NCBI-GeneID:
129367803
NCBI-ProteinID:
XP_054898387
LinkDB
All DBs
Position
Unknown
AA seq
459 aa
AA seq
DB search
MEEKLNGSLPVVSPEYLHQWVRSAQQFQALQAQYANFNLQHQFHYLENPTAEAARAHTAN
PEPTMEQTEPADLTKPPTKKRGRRVQPKEPGAPKPPKIPKAPKPPKVPKAPKPPKDPNAP
KAKPGPKPKKATGAQGEGKQEKIDESFKKVKRKVDRFKGMTEEEVMKKTLPDLLDYNLDY
VIIGINPGLMAAFIGRWFPGPGNHFWKCLFLSGFTEEQLNHMHDTTLPVKYKMGFTNMVS
RATPGSKDLSSKELREGGKILVEKLKKYKPLIAVFNGKCIYEMFCRELFGKKPQKLEFGL
QPHKIPECDVALYLMPSSSARCAQFPRAQDKVHFYIKLRELRDQLKGIRKATEIEEVNYT
FDLQLAKEDAKRLAIKEEQYDPGYEDAYGGAYVERGAEEGQANSQTNGHCTLSSTAISEG
AQEATTSQSEGQLPHGQWMTQSFADEIPNIGSGPNAGSV
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaaagctgaatggatcactgcctgttgtctccccggagtatcttcatcagtgg
gttcggtccgcccagcagtttcaagctctccaggctcagtacgccaacttcaaccttcaa
catcagttccactacctagagaatccgactgcagaggcggccagagcccacacggccaac
ccagaacccaccatggagcagacggaacctgctgacctaaccaaacctccaactaaaaag
aggggtagacgagttcaacccaaggaaccaggcgcaccaaagccccccaaaatccccaaa
gcaccaaaacccccaaaggtcccgaaagccccaaaaccaccaaaagacccaaatgcacca
aaagctaaaccgggtccaaaacccaagaaggccactggggctcagggtgaaggcaagcag
gagaagatcgatgagagcttcaagaaggtgaagaggaaagtggaccgcttcaaagggatg
acggaggaggaagtcatgaagaagactttgcccgacctgctggattacaacctggactat
gtcattatcggtataaacccaggactcatggcagcttttattggccggtggtttccagga
cctggaaatcatttttggaaatgcctgtttctgtcgggatttaccgaggagcagctcaac
cacatgcacgacacgacgctgccggtcaaatacaaaatgggcttcaccaatatggtatcc
agagcaacaccagggagcaaagacctctcaagtaaagaattgcgagaaggaggtaaaatc
cttgtggagaagctgaagaagtacaaaccgctcattgctgtgttcaatggaaaatgcatc
tatgaaatgttctgcagggaactgtttggcaagaaaccacaaaagctggaattcggtttg
cagccgcacaagatcccagaatgtgatgtggccttgtacctgatgccttcctccagcgcc
cgctgtgcccagtttcctcgagctcaggacaaagttcacttctacatcaaactgcgggag
ctccgggatcaactgaagggcatccggaaggccaccgagatcgaggaagtcaactacacg
ttcgatcttcagttagctaaggaggatgccaagaggttagccataaaggaggagcagtac
gacccgggatatgaggacgcctacggcggcgcgtatgtggagagaggagctgaagaaggc
caggccaatagtcagaccaacggtcactgtacgctctcgtctaccgccatctcagaagga
gcacaggaggcgaccacatcccaatcagagggtcagctcccacacggacagtggatgacc
cagtcgtttgccgacgagattcccaacatcggcagcggaccaaacgccggcagcgtgtga
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