Poeciliopsis prolifica (blackstripe livebearer): 129372794
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Entry
129372794 CDS
T09758
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm3
KO
K12622
U6 snRNA-associated Sm-like protein LSm3
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl03018
RNA degradation
pprl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129372794
09123 Folding, sorting and degradation
03018 RNA degradation
129372794
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pprl03019
]
129372794
03041 Spliceosome [BR:
pprl03041
]
129372794
Messenger RNA biogenesis [BR:
pprl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
129372794
mRNA degradation factors
5'-3' decay
Lsm complex
129372794
Spliceosome [BR:
pprl03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
129372794
Complex C
U2 snRNP components
129372794
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
TIG_SUH
vATP-synt_E
DUF150_C
Glutaredoxin
Motif
Other DBs
NCBI-GeneID:
129372794
NCBI-ProteinID:
XP_054906275
LinkDB
All DBs
Position
Unknown
AA seq
102 aa
AA seq
DB search
MADEVEQQPTTNTVEEPLDLIRLSLDERIYVKMRNDRELRGRLHAYDQHLNMILGDVEET
VTTVEIDEETYEELYKSTKRNIPMLFVRGDGVVLVAPPLRVG
NT seq
309 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaagttgagcagcaaccaactaccaacacagtcgaggagccgcttgacctg
atcaggctcagtttggacgagcggatctatgtcaagatgaggaacgaccgggagctccgg
ggccgtctgcatgcatatgatcagcacctgaacatgatcctgggggatgtggaggagacg
gtgacgactgtggagattgatgaggagacgtatgaggaactctacaagtctacaaagagg
aacatccccatgctgtttgtcagaggtgacggcgtggttcttgtagctccgcccctcagg
gtgggctga
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