Poeciliopsis prolifica (blackstripe livebearer): 129373688
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Entry
129373688 CDS
T09758
Symbol
eftud2
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129373688 (eftud2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pprl03041
]
129373688 (eftud2)
Spliceosome [BR:
pprl03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
129373688 (eftud2)
Complex C
U5 SnRNP specific factors
129373688 (eftud2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
EF-G_D2
Roc
Ras
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
129373688
NCBI-ProteinID:
XP_054907698
LinkDB
All DBs
Position
Unknown
AA seq
971 aa
AA seq
DB search
MEADLYDEFGNYIGPELDSDDDDDDLDAEDRDIDEGDEDEEDEPANEDENVPGMEVVLHE
DKKYYPTAEEVYGPEVETIVQEEDTQPLTEPIIKPVKHKKFTLMEQELPATVYDMEFLAD
LMDGTELIRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKRDDVDLRYTDILFTEQERGVGI
KSTPVTMVLPDSRGKSYLFNIMDTPGHVNFSDEVTSSMRISDGVVLFIDAAEGVMLNTER
LIKHAVQERMAITICINKVDRLIVELKLPPTDAYYKLRHIVDEVNGLLSTYSTDENLVVS
PLLGNVCFASSQYSICFTLGSFAKIYSDTYGDINYNEFAKRLWGDIYFNPKTRKFTKKAP
TSNSQRSFVEFVLEPLYKILSQVVGDVDTTLPRVLDELGIHLTKEELKLNIRPLLRLVCN
RFFGEFTGFVDMCVQHIPSPQEGAKIKIDHTYTGGLDSDLGEAMAECDPDGPLMCHTTKM
YSTEDGVQFHAFGRVLSGTIQAGQPVKVLGENYTLDDEEDSQICTVGRLWISVARYQIEV
NRVPAGNWVLIEGCDQPIVKTATITEPRGNEEAQIFRPLKFNTASVIKIAVEPVNPSELP
KMLDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVVT
FCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWNRKKLGEFFQTK
YDWDLLAARSIWAFGPDTTGPNILVDDTLPSEVDKALLGSVKDSIVQGFQWGTREGPLCD
EPIRNVKFKILDAVIAQEPLHRGGGQVIPTARRVVYSAFLMATPRLMEPYYFVEVQAPAD
CVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFALSVF
HHWQIVPGDPLDKSIVIRPLEPQPAPHLAREFMIKTRRRKGLSEDVSISKFFDDPMLLEL
AKQDVVLNYPM
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atggaggctgatttgtatgacgagtttggtaattacatcggtccagagctggactctgat
gacgatgatgatgacctggatgcagaggacagggatattgacgagggggatgaagatgaa
gaagatgagcctgcaaatgaggatgagaacgtacctggcatggaggtggtcctgcatgag
gacaaaaaatactatcccacagcggaggaggtttacgggccagaagtggaaactattgtc
caggaagaagatacacaaccgcttactgagcccattatcaagccagtcaagcacaagaag
ttcacattgatggagcaggagttacctgccactgtttatgacatggagtttctggcagat
ttgatggacggtaccgagctgatccgtaacgtcaccctctgtggtcacctccaccatggc
aagacgtgttttgtggactgcctgattgagcaaactcatcctgaaatcagaaagagagat
gatgttgatctccggtacacagacatccttttcactgagcaggagcgaggagtcggcatc
aaaagcactccagtcacgatggtgctgcctgactctagaggaaaatcgtaccttttcaac
atcatggacacaccaggccatgtgaacttctctgatgaggtcacatccagcatgaggatc
tcagatggagttgtcctcttcatcgatgcagctgaaggagtgatgctgaacacggagcgt
ctgatcaaacatgcagtgcaggagcgcatggccatcaccatctgcatcaacaaggtggac
cggctcattgttgagctcaaactgccgccaacagacgcttattataaacttcgacacatt
gtggatgaggtcaacggtttgctcagtacgtactccacagacgagaacttggtggtatct
ccgctcctcggcaacgtttgcttcgccagttctcagtatagcatctgtttcaccctgggg
tcctttgccaagatctactcagacacctacggtgatatcaactataacgagtttgcaaag
cggctttggggagacatttatttcaaccccaaaactcgtaagttcacaaagaaagctccc
accagtaactcccagcgcagctttgtggagtttgtcctggagcctctttacaagatcctc
tcacaggtggttggggacgtggacaccaccctgccccgggttctggatgaacttgggatc
catctgaccaaggaggagctgaagctgaacatcaggcctctgctccggctggtctgtaac
cgtttcttcggagagttcaccggttttgtggacatgtgcgtgcagcacatcccctcacca
caagagggtgctaaaataaagatagaccacacatacacaggaggactagactctgacttg
ggagaagccatggcagaatgtgatcctgatggtcctttgatgtgccacaccactaaaatg
tacagcactgaagatggggtccagttccacgccttcggcagggttctgagcggtaccatt
caggcaggtcagccggtcaaggttctgggagagaattacacgctggatgacgaggaagac
tcgcagatttgcaccgtgggtcgcctctggatctctgttgccagataccaaatcgaagtg
aaccgagttcctgcaggaaactgggttctgattgaaggctgtgaccagccaatcgtgaag
acggccaccatcacagaacctcgggggaatgaagaggctcagattttcaggccgttaaag
tttaacacagcttcggtcatcaagatcgccgtggagcccgtcaacccgtccgagcttccc
aagatgttggacggactgaggaaggtcaacaagagctacccttctctaaccacaaaggtg
gaggagtctggagaacatgtcatcttagggacaggagagctttacctggattgtgtcatg
catgatctgaggaagatgtactcagaaattgacattaaagttgctgatcccgttgtgact
ttttgtgaaacggtggttgagacttcgtctcttaagtgctttgctgagacgcccaacaaa
aagaataagatcaccatgattgctgagcctctggagaaggggctcgccgaggacatcgag
aacgaagtggtgcagatcacttggaacaggaagaagctgggagagttcttccagacgaag
tacgactgggatctgctggctgccaggtctatctgggcctttggaccagacacaacaggg
ccaaatattctcgtggatgacacgcttccttcggaggtggacaaagctttgctcggttca
gtcaaagacagcatcgttcagggcttccagtggggcacaagggagggacctctgtgtgat
gagcctattagaaatgtgaagtttaagatcctggatgccgtcattgctcaggagcctctc
cacagaggaggaggtcaggtcatccccacagccaggagggtcgtctactccgcctttctc
atggccacaccaaggttaatggagccatattactttgtggaggtccaggctccagctgac
tgtgtatctgccgtctacaccgttctggcaagaagaagaggtcacgtcacccaggacgca
cccattcccggctctcctctttacaccatcaaggctttcatcccggccatagactcgttc
ggctttgagactgaccttcgcacacacacacagggtcaggccttcgcgctgtctgtgttc
caccactggcagattgttcccggtgacccgctggacaagagcatcgtgatccggcccctc
gagcctcaacccgccccccacctggcccgagagttcatgatcaagaccaggagacgcaag
ggtctgagcgaagatgtgagtatcagcaagttcttcgacgatcccatgttgttggagttg
gcgaagcaggatgtggtgcttaattatccgatgtga
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