Poeciliopsis prolifica (blackstripe livebearer): 129373703
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Entry
129373703 CDS
T09758
Name
(RefSeq) LOW QUALITY PROTEIN: sodium channel protein type 4 subunit alpha B-like
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pprl04040
]
129373703
Ion channels [BR:
pprl04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
129373703
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
GPHH
SieB
PKD_channel
Motif
Other DBs
NCBI-GeneID:
129373703
NCBI-ProteinID:
XP_054907725
LinkDB
All DBs
Position
Unknown
AA seq
1684 aa
AA seq
DB search
MAPLLPPVGTEMFRRFTPASLEEIQRKHEAEAKQQQIRKDKNIKIAKKYLPKPAGDLEDG
QPLPLFYGDRAQEFLNIPLEDMDPFYQSHKTFIVLSKGKTIYRFNAEPACYLLSPFNSLR
IFSIRILIHSLFSFFIMAAILTDCVFMTMSDPPAWSKTVEYVVMVIYTFEVIVKVLSRGF
CVGDFTYLRNPWNWLEFMVINMIYLAEFTLFRDVSALRPFRVLRVLKIITVFSGLRTIFS
AVIQSVKKLRDVMILTFFFLSIFALIGLQLFMGNLRQKCVITSSYNRNLSEGAFNISSHE
NNSSDFDFNTHVNNPDNYYHLPGHLDALLCGNSSDAGTCPEGYMCLKAGRNPNYGYTSYD
SFSWAFLSLFRLMTQDFWENLFHLTLRAAGKTYTIFFVVVIFLGSFYLMNLILAVVAMAY
AEQNRANIAKAKQREREYARILKELKEREEKMVKRAAPLEKNGSASHEDDNTRDDLEDDQ
RPRSSRWFIFADTFLKWDCCGCWRRLKKLLHTVVMDAFVDVAITMCIVLYTVLMAIEHYP
ATTEVEELISIGNLVLTGILTAEMVLKILAMDPYHYFQEGWNIFDSIIVTMSLVDLGLAG
VHSLAVWRPCRLIRVFKLAKSWPAFNVLIKIIRNSLRALGNLTLLLAIFVFIFTVFGMQL
LEKSYKDHVCPIALDCELPRWHMNDFFHAFLVIFRMLVGEWIETMWDCMEVAGKPTCLIV
YMMVVVIGKLVVLNLFLALLLSSFSGDNLAVTEDEGENNLQIVINRISRGTARTKARFWT
LVGKKTNVNSDVNDVTCEEGDKSKEILPLTIVNSQQSVVKVQDPEETKTCFEAKSDSEIS
KSKDDEDNEEEDKDEQLPQGEKSLDCSDMERFPVISIVKEVESTPDDCFTEKCYSCCPCL
DIDTSQSIGRIWLHIRKTCIAIVESKYFKSFIIMVILLSSAALAFEDIYIEQRRDIKIIL
EYADQVFNFVFVVEIILKLSASGCKTFFSNAWCWLDFLIADVSLVLLSASILGYSELGAI
KTLRTLRALRPLRVLSCFEGLRVRLAVXIVIYYCLVGLAFHSLLSYLLAVNALVGAIPSI
FNVLLVCLIFWLIFSIMGVNLFAGKFYHCFNETSEERFLPEDVNNKTQCLDLIEKGSSEV
RWKNTKINFDNVGMGYLSLLQVATFKGWLDIMYAAVDSREVESQPVYEDNLFVYLYFVCF
IIFGSFIPFCLFITSLINFNQRKPKPVEIEPPIKWMPREPPPRPTNKFQGLVFDLVTHPF
FDIFIMVLICLFTLMMMVETDDQSPEMEEILYWVNFVFIMIFSTECCLKIFALRKHYCYD
GWNIFDLVVIIFSIVGLSFHTLFRVTRLARIGLILRLIRRAKRIRKLLFAFRKSLPAVFN
LCILLFIIMFVFSIFGMSNFAYVKQGAMMDDLVNFETFGNSMISMFTITTLAGWDGLLYP
IMNTPPDCDPDFENPGTSVRGNCGSPAAGIVFLTLYIIVSFLVVVKIQITIILEVFNVAA
EESANTLSEYSIDMFYKTWERFDPQASQFIHYSELSDLCDALPDPLRIPKPNTVNLLQMD
LPLVQGDRVHCLDVLLALTEEVFGESQATEELKSTMEWKFLAKIASEESLRPIVSTFRKK
HEEMAATAIQRAYRRHVQERGNKQESYQXMEKTEGQGDNLSPPETEGFLCKPMAQLYGDS
LKTL
NT seq
5055 nt
NT seq
+upstream
nt +downstream
nt
atggcccctctgctgccccctgttggtacggagatgtttagacgcttcacaccagcctca
ctggaggaaattcagcgaaagcatgaagctgaagcgaagcagcagcaaatcagaaaggat
aagaacatcaagatagcaaagaagtatcttcctaaaccggcaggcgatctggaggatggg
cagcccctccccttgttttatggagaccgcgcccaggagtttctcaacatcccattggag
gacatggaccccttctaccaatcacacaagaccttcatcgttctcagcaaaggaaaaacc
atctacaggttcaatgccgaaccagcttgttacctgctgagtcccttcaactctctgagg
atcttctccatcaggatcctcatccattctttattcagttttttcatcatggcggctatc
ctgactgactgtgtgttcatgaccatgagtgaccctccagcatggagcaagacggtggaa
tatgtggtcatggtgatctacacgtttgaggtaatcgtcaaagtgttatccagagggttc
tgcgtgggagacttcacctacctcagaaacccctggaactggctggagttcatggtcatc
aacatgatatacctggcagagtttaccctctttcgagatgtatcagcactgaggccattc
agagttcttcgagtcctgaaaatcatcacagtattctctggtttaaggacaatcttcagt
gccgtcatccagtcggtgaagaagctgcgtgatgtcatgattctgaccttcttttttctt
agcatctttgctctgattggtcttcagctgttcatgggaaacctcagacaaaaatgcgtt
attacgtcgtcatacaatagaaacctatcagagggagctttcaacatcagttcccacgaa
aacaacagcagtgactttgatttcaacacacacgttaacaacccagacaattattaccac
ctacctggtcatcttgatgcgctgctgtgtggaaacagctctgatgcagggacctgtcca
gagggatacatgtgtctgaaggcagggagaaacccaaactatgggtataccagctacgac
agtttcagctgggcgtttctgtctctgttcagactcatgactcaggacttctgggaaaat
ctcttccacctgacgctgcgggcggcaggtaaaacctacaccatcttcttcgtggtcgtc
atcttccttggttccttctacctcatgaacctcatcctggcggtggtggccatggcgtac
gctgagcaaaacagggcgaacatcgccaaggccaaacagagagaaagggagtatgcccgc
atccttaaggagttaaaggaaagagaagagaagatggtcaagagggcggcgccgttggag
aaaaacggctctgcttcacatgaggacgataacaccagggatgacctagaggacgaccag
aggccgcgttcgtcacgctggttcatctttgctgacaccttcctgaagtgggattgttgt
ggctgttggagacggttgaaaaagcttctgcatactgttgtcatggatgcatttgtggac
gtcgccatcaccatgtgcattgtcctctacactgtcttgatggccattgagcattatcca
gcgactacggaggttgaggagcttatcagcattggaaacctggtgctgacaggcatctta
acagctgagatggttctcaaaattctggcgatggatccatatcattactttcaggaaggc
tggaatatcttcgatagcatcatcgtcacaatgagtctggtggatctgggactggctggt
gttcatagtctcgctgtgtggcggccctgcagattgattagagtgtttaagctcgccaag
tcgtggccggctttcaacgtgttgataaagatcatccgcaactctctgagagccctgggg
aacttgacgctgcttctcgccatctttgtcttcatcttcactgtatttgggatgcagttg
cttgaaaagagctacaaagatcatgtctgtcccattgccttggattgtgagcttcctcgc
tggcacatgaacgacttctttcatgccttcctcgtcatcttcaggatgctggttggcgag
tggattgagacaatgtgggactgtatggaagtcgcagggaagcctacatgcctgattgtc
tacatgatggtagtggtgatcggaaaactagtggttctgaatctgttcctagccttgctg
ctaagctcattcagtggggataatcttgcagttactgaagatgaaggagagaataatctc
cagattgtgataaaccggatcagcaggggcacagcaaggactaaggcccggttctggact
ttggtgggaaagaaaacaaacgtaaactcagatgtaaatgatgtaacttgtgaagaaggc
gacaaatcaaaggaaattttacctctgacaatcgtaaattcacagcaatcggtggtaaaa
gtccaagaccccgaagaaaccaaaacctgcttcgaagccaaatctgactctgagatatca
aaaagtaaagatgatgaggataatgaggaggaagacaaagatgaacaacttccacaaggt
gaaaagtctttggactgcagcgacatggagagatttcctgtaatctcaatagtgaaagag
gtagaaagcactcctgacgattgtttcacagaaaagtgttacagttgctgtccatgcctg
gatatagacacgtcccagagcataggaaggatctggttacatatcagaaaaacttgcatc
gccatcgtagagtccaagtactttaagtcattcatcatcatggtgatcctgctgagcagt
gcagctctggcctttgaggacatctacattgagcagcgccgggacatcaagataattctg
gaatatgcagatcaggttttcaacttcgtgtttgtggtggagataattctcaagctgagc
gcctctggatgtaaaaccttcttctccaacgcctggtgctggctggacttccttattgca
gatgtgtctctggtgttactgtcagcaagcatcctgggatactctgagctgggagctatc
aaaactctgaggactctgagagcattgagaccccttagagtcttgtcttgctttgagggc
ttgagggtaagactggcagtttaaatcgtgatatattactgtctggttggtttagcattt
cactcactcctgtcgtatctgctggcggttaatgccttggttggtgccatcccctccatc
ttcaacgtgctgctggtctgtctgatcttctggctcatctttagcatcatgggtgtgaac
ctgtttgcagggaagttttatcactgcttcaacgaaacatcagaggagcgtttccttcct
gaggatgtcaacaataaaacccagtgtctcgatttgattgagaagggctcctccgaggtt
cgctggaagaacacaaagatcaattttgacaacgttgggatgggctacctgtctctgctg
caagtggccacatttaaaggctggctggacatcatgtatgcagcggtggactccagagag
gtggagtctcagccagtgtatgaggacaacctgttcgtctacttgtactttgtctgcttc
atcatctttggctccttcattcctttctgcctcttcatcacttcactcatcaacttcaac
cagcgtaaaccaaagcctgtagaaatagaaccgccgataaaatggatgcccagagagcct
ccgccccgaccgacgaacaagtttcagggtctagtcttcgaccttgtgacccatccgttt
tttgacatcttcatcatggtgttgatctgccttttcacgttgatgatgatggtggaaaca
gacgaccagagtccggagatggaagaaatcctgtactgggtcaacttcgttttcatcatg
atcttcagcacagagtgttgtctcaaaatctttgctctacgaaagcattactgttatgat
gggtggaacatatttgaccttgtggtgataatattctctattgttggtttatcttttcat
actctcttccgtgtgacccgactggctcgcattggcctgatcctccgtctcattcgcaga
gccaagagaattagaaagctgttgtttgcattcagaaagtcccttcctgctgtattcaac
ctatgcatcctcctcttcatcatcatgtttgtcttctccatctttgggatgtcgaatttt
gcttacgtgaagcagggggccatgatggatgacttggtgaactttgagacctttgggaac
agtatgatctccatgtttacgatcaccacattagctggatgggacggtcttctctatccc
atcatgaacacacctccagactgtgatccagactttgaaaacccaggcacgtctgtcagg
ggcaactgcggcagcccggcagcaggcattgtcttcttgactttgtatatcattgtgtcc
tttctggtggtggtcaagatacagatcaccatcatcctggaggtatttaacgtcgctgca
gaggagagcgccaacacactatctgagtacagcattgatatgttctataaaacctgggag
aggtttgacccacaagcttcgcaatttattcactacagtgagctgtcagatctctgtgat
gctctaccggatcctctcaggatccccaagcccaacaccgtcaacctgctacaaatggac
ctgcctttggttcaaggagacagggtccactgtctggacgtcctgctagctctcactgag
gaggtttttggtgaatcccaggcaacagaggaactaaagtcaaccatggagtggaagttc
ctggccaaaattgcttcagaggagagtttaagaccaatcgtcagcacctttcgaaagaaa
cacgaggagatggcagcaacagcgatccagagagcctacaggagacacgttcaggagcga
gggaacaagcaggagtcctaccagtaaatggaaaagacagagggacagggggacaatctg
tctccaccagagacggagggatttctctgtaaaccaatggctcagctgtacggagacagt
cttaaaactctttaa
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integrated database retrieval system
