KEGG   Poeciliopsis prolifica (blackstripe livebearer): 129374289
Entry
129374289         CDS       T09758                                 
Name
(RefSeq) TNF receptor-associated factor 2-like
  KO
K03173  TNF receptor-associated factor 2 [EC:2.3.2.27]
Organism
pprl  Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl04010  MAPK signaling pathway
pprl04137  Mitophagy - animal
pprl04141  Protein processing in endoplasmic reticulum
pprl04210  Apoptosis
pprl04217  Necroptosis
pprl04621  NOD-like receptor signaling pathway
pprl04622  RIG-I-like receptor signaling pathway
pprl04920  Adipocytokine signaling pathway
pprl05132  Salmonella infection
pprl05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:pprl00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    129374289
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    129374289
 09140 Cellular Processes
  09141 Transport and catabolism
   04137 Mitophagy - animal
    129374289
  09143 Cell growth and death
   04210 Apoptosis
    129374289
   04217 Necroptosis
    129374289
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    129374289
   04622 RIG-I-like receptor signaling pathway
    129374289
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    129374289
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    129374289
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    129374289
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pprl03019]
    129374289
   04121 Ubiquitin system [BR:pprl04121]
    129374289
Enzymes [BR:pprl01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     129374289
Messenger RNA biogenesis [BR:pprl03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     129374289
Ubiquitin system [BR:pprl04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRAF proteins
    129374289
SSDB
Motif
Pfam: TRAF-mep_MATH MATH_2 TRAF_BIRC3_bd zf-TRAF TRAF2_zf TRAF3_RING zf-C3HC4 zf-C3HC4_2 ATG16 zf-C3HC4_4 SlyX zf-RING_6
Other DBs
NCBI-GeneID: 129374289
NCBI-ProteinID: XP_054908608
LinkDB
Position
Unknown
AA seq 596 aa
MATQEPSPPSSMESNKPGYPKKILGNKLEDKHLCNCCHNILRRPFQAQCGHRFCSFCFNR
TVSNGPQKCNACIKEDIFEEPTSVLKQGCAFPDNAVRREVESLSAVCINEDCTWEGTIKE
YELNHEGKCEFMIIPCPSCKERIRFNEQERHNERGCPERTLNCKYCKEPFHFKNIKAHDE
ICPKYPMICEGCAKKKIPREKYVDHIKLCTKFRTPCRFHVVGCDMSVEKEKIHDHERAYA
YEHLNLLLHYIMGMKVSMEGLQPQGLEVAGHKLLELQQSLRELEARVSQLSITSSGPPVQ
GAAASSSSSSACSAGPPASAPLPPPPTLPPTLSVSTSFTPLPSSVGAALELQLHSEKTKV
AELGRRCTELEVKAGTFENVVCVLNREVERFATTMEASNRQHKLDQDKIEALSNKVRQLE
RTVGLKDLTVVEMEGRLREMSATTFDGIFIWRISDFAKKRQDAIAGRAPAMFSPAFYTSK
YGYKMCLRIYLNGDGTGRGSHLSLFFVVMRGLNDALLKWPFNQKVTLMLLDQSNREHIID
AFRPDVTSSSFQRPVSEMNIASGCPLFCPLSKLDGKNSYIRDDAIFIKAIVDLTGL
NT seq 1791 nt   +upstreamnt  +downstreamnt
atggccacacaggaaccatcccctccgtcgtccatggagagcaataaacccggctacccc
aagaagatcctgggcaacaagctggaggacaagcacctgtgcaactgctgccacaacatc
ctcaggcggccatttcaagcccagtgtggacatcgcttctgctccttctgcttcaacagg
accgtgagtaatggaccccagaaatgcaacgcttgcataaaagaagatatttttgaggag
ccgacatcagttttgaagcagggatgtgcatttcctgacaatgccgttcgaagggaagtt
gaaagcctgtctgcggtttgtatcaatgaggactgtacttgggaaggaaccattaaagag
tatgagctgaatcacgaggggaagtgcgagttcatgatcatcccctgcccctcctgcaaa
gaacgaatccgcttcaacgagcaggagcgccacaacgagagggggtgcccggagaggacg
ctcaactgcaagtactgcaaagagccatttcacttcaaaaacatcaaggctcatgacgaa
atctgccccaagtatccgatgatctgtgaaggttgtgccaagaagaaaatacccagagag
aagtatgtggaccatattaaactctgcactaaattccgaactccatgtcggtttcatgtc
gttggatgtgacatgtctgtggagaaagagaagattcatgaccacgaacgcgcttacgcc
tacgagcatcttaacctgctcctgcactacattatgggtatgaaggtgagcatggagggc
ctgcagccccagggactggaagtagccggacacaaactgttagaactccaacaatccctc
agggaactcgaggccagagtctcccagctcagcatcacctcttcagggcctcccgtgcag
ggagctgccgcttcctcctcttcttcctccgcctgcagcgccggcccgcccgcatcggct
cctcttcctccacctcccactcttcctccgacgctctccgtgtctacctcgttcacaccc
ctgcccagctcggtgggcgcggcgctggagctccagctccacagcgagaagaccaaggtg
gccgagcttggccgcagatgcacggaactggaggtcaaggcggggacgtttgaaaatgtg
gtgtgcgttcttaacagggaggtggagaggtttgccacaaccatggaggccagcaaccgg
cagcataaactggaccaagacaagatcgaagcgctcagtaataaggtgcgacagctggag
aggaccgtcggactgaaggacctcacggtggtggagatggagggccgactgagagaaatg
tccgccaccacgtttgacggcatcttcatctggaggatctcagactttgccaaaaaacga
caagatgccatcgcaggccgggctcccgccatgttctcaccagctttctatactagcaag
tacggctacaagatgtgcctgaggatctacctgaacggagacgggacggggcgtggcagc
cacctgtccctgttcttcgtggtgatgaggggactgaacgacgctctgctcaaatggccg
ttcaaccagaaggtgacactgatgctgctggaccagagcaacagggagcacatcatcgac
gcctttcgacccgacgtcacgtcttcttcctttcaacgacccgtgagcgagatgaacatc
gccagcggctgcccgctcttctgcccgctctccaagctggacgggaagaactcgtacatt
cgcgacgacgcgatattcatcaaagccatcgtggacctcaccggcctctag

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