Poeciliopsis prolifica (blackstripe livebearer): 129374289
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Entry
129374289 CDS
T09758
Name
(RefSeq) TNF receptor-associated factor 2-like
KO
K03173
TNF receptor-associated factor 2 [EC:
2.3.2.27
]
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl04010
MAPK signaling pathway
pprl04137
Mitophagy - animal
pprl04141
Protein processing in endoplasmic reticulum
pprl04210
Apoptosis
pprl04217
Necroptosis
pprl04621
NOD-like receptor signaling pathway
pprl04622
RIG-I-like receptor signaling pathway
pprl04920
Adipocytokine signaling pathway
pprl05132
Salmonella infection
pprl05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
129374289
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
129374289
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
129374289
09143 Cell growth and death
04210 Apoptosis
129374289
04217 Necroptosis
129374289
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
129374289
04622 RIG-I-like receptor signaling pathway
129374289
09152 Endocrine system
04920 Adipocytokine signaling pathway
129374289
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
129374289
09171 Infectious disease: bacterial
05132 Salmonella infection
129374289
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pprl03019
]
129374289
04121 Ubiquitin system [BR:
pprl04121
]
129374289
Enzymes [BR:
pprl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129374289
Messenger RNA biogenesis [BR:
pprl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
129374289
Ubiquitin system [BR:
pprl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
129374289
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
TRAF_BIRC3_bd
zf-TRAF
TRAF2_zf
TRAF3_RING
zf-C3HC4
zf-C3HC4_2
ATG16
zf-C3HC4_4
SlyX
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
129374289
NCBI-ProteinID:
XP_054908608
LinkDB
All DBs
Position
Unknown
AA seq
596 aa
AA seq
DB search
MATQEPSPPSSMESNKPGYPKKILGNKLEDKHLCNCCHNILRRPFQAQCGHRFCSFCFNR
TVSNGPQKCNACIKEDIFEEPTSVLKQGCAFPDNAVRREVESLSAVCINEDCTWEGTIKE
YELNHEGKCEFMIIPCPSCKERIRFNEQERHNERGCPERTLNCKYCKEPFHFKNIKAHDE
ICPKYPMICEGCAKKKIPREKYVDHIKLCTKFRTPCRFHVVGCDMSVEKEKIHDHERAYA
YEHLNLLLHYIMGMKVSMEGLQPQGLEVAGHKLLELQQSLRELEARVSQLSITSSGPPVQ
GAAASSSSSSACSAGPPASAPLPPPPTLPPTLSVSTSFTPLPSSVGAALELQLHSEKTKV
AELGRRCTELEVKAGTFENVVCVLNREVERFATTMEASNRQHKLDQDKIEALSNKVRQLE
RTVGLKDLTVVEMEGRLREMSATTFDGIFIWRISDFAKKRQDAIAGRAPAMFSPAFYTSK
YGYKMCLRIYLNGDGTGRGSHLSLFFVVMRGLNDALLKWPFNQKVTLMLLDQSNREHIID
AFRPDVTSSSFQRPVSEMNIASGCPLFCPLSKLDGKNSYIRDDAIFIKAIVDLTGL
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atggccacacaggaaccatcccctccgtcgtccatggagagcaataaacccggctacccc
aagaagatcctgggcaacaagctggaggacaagcacctgtgcaactgctgccacaacatc
ctcaggcggccatttcaagcccagtgtggacatcgcttctgctccttctgcttcaacagg
accgtgagtaatggaccccagaaatgcaacgcttgcataaaagaagatatttttgaggag
ccgacatcagttttgaagcagggatgtgcatttcctgacaatgccgttcgaagggaagtt
gaaagcctgtctgcggtttgtatcaatgaggactgtacttgggaaggaaccattaaagag
tatgagctgaatcacgaggggaagtgcgagttcatgatcatcccctgcccctcctgcaaa
gaacgaatccgcttcaacgagcaggagcgccacaacgagagggggtgcccggagaggacg
ctcaactgcaagtactgcaaagagccatttcacttcaaaaacatcaaggctcatgacgaa
atctgccccaagtatccgatgatctgtgaaggttgtgccaagaagaaaatacccagagag
aagtatgtggaccatattaaactctgcactaaattccgaactccatgtcggtttcatgtc
gttggatgtgacatgtctgtggagaaagagaagattcatgaccacgaacgcgcttacgcc
tacgagcatcttaacctgctcctgcactacattatgggtatgaaggtgagcatggagggc
ctgcagccccagggactggaagtagccggacacaaactgttagaactccaacaatccctc
agggaactcgaggccagagtctcccagctcagcatcacctcttcagggcctcccgtgcag
ggagctgccgcttcctcctcttcttcctccgcctgcagcgccggcccgcccgcatcggct
cctcttcctccacctcccactcttcctccgacgctctccgtgtctacctcgttcacaccc
ctgcccagctcggtgggcgcggcgctggagctccagctccacagcgagaagaccaaggtg
gccgagcttggccgcagatgcacggaactggaggtcaaggcggggacgtttgaaaatgtg
gtgtgcgttcttaacagggaggtggagaggtttgccacaaccatggaggccagcaaccgg
cagcataaactggaccaagacaagatcgaagcgctcagtaataaggtgcgacagctggag
aggaccgtcggactgaaggacctcacggtggtggagatggagggccgactgagagaaatg
tccgccaccacgtttgacggcatcttcatctggaggatctcagactttgccaaaaaacga
caagatgccatcgcaggccgggctcccgccatgttctcaccagctttctatactagcaag
tacggctacaagatgtgcctgaggatctacctgaacggagacgggacggggcgtggcagc
cacctgtccctgttcttcgtggtgatgaggggactgaacgacgctctgctcaaatggccg
ttcaaccagaaggtgacactgatgctgctggaccagagcaacagggagcacatcatcgac
gcctttcgacccgacgtcacgtcttcttcctttcaacgacccgtgagcgagatgaacatc
gccagcggctgcccgctcttctgcccgctctccaagctggacgggaagaactcgtacatt
cgcgacgacgcgatattcatcaaagccatcgtggacctcaccggcctctag
DBGET
integrated database retrieval system