Poeciliopsis prolifica (blackstripe livebearer): 129374809
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Entry
129374809 CDS
T09758
Symbol
c9orf72
Name
(RefSeq) guanine nucleotide exchange factor C9orf72 homolog isoform X1
KO
K23609
guanine nucleotide exchange protein C9orf72
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
129374809 (c9orf72)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pprl04131
]
129374809 (c9orf72)
Membrane trafficking [BR:
pprl04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
129374809 (c9orf72)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C9orf72-like
Motif
Other DBs
NCBI-GeneID:
129374809
NCBI-ProteinID:
XP_054909428
LinkDB
All DBs
Position
Unknown
AA seq
485 aa
AA seq
DB search
MDSGSGPAVPQVVAKLEGDVSGPMSSGCPPQSPAVAKTEVAVEGECPLLAATFAYWDNIL
GPRVRHMWAPRGEQPMALSDGEVTFLANHTLNGEILRNAECGAVDVKFFVLAEKGVIIVS
LIFDGELKGDKNTCALSVILPQTELAFYLPLHAACVERLTHGIRKGRIWMQKGYNIISVL
SLEIAPIMELLASMKSHCVPEEIDIRDTVLNDDDIGDSCHEGFLHKAISSHLQTCGCSVV
VGSNPEKVNKIVRTLCLFLTPAERKCSRLCRASSSFKYDTGLFVQGLLKDSTGSFVLPFR
QVLYAPYPTTHIDVDINTVKQMPPCHEHTFNQRRYMRSELNALWKTDSEDDIPPETVIHT
DETFTPDLNIFQDVLHTDTLVRSFIDEVFLLKPGLALRSAYLAQFLLLLHRKALTLLKYI
EDETQKGKKPFRALRNLKADLDLKAEGDLNIVMAMAEKLRAGLHSFVFGKPFYTSVQERD
VLMSF
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggactctggttccggtccagcagttcctcaggttgtagctaaattagagggagacgtc
tccggtccaatgtcctcgggctgtcccccccagtccccggccgtagccaagacagaggta
gcggtggagggagagtgccccctgctggcagctaccttcgcctactgggacaacatcctg
gggccgcgcgtgcgccacatgtgggcgccgcgtggcgagcagccgatggcgctgagcgac
ggcgaggtcaccttcctggccaaccacacgctgaacggagagatcctgcgcaacgccgag
tgcggcgccgtggacgtcaagttcttcgtcctggcagagaaaggcgtcatcatcgtgtct
ctgatcttcgacggcgagctgaagggcgacaagaacacgtgcgccctgtctgtcatcctg
ccgcagaccgagctggccttctacctgccgctgcacgctgcctgcgtggagcggctcaca
cacggcatccgcaagggacgcatctggatgcagaagggctacaacatcatctcggtgctg
agcctggagatcgcccccatcatggagctgctggcctccatgaagtctcactgcgttcct
gaggaaatcgacatcagagacaccgtgctaaatgatgacgacatcggggacagctgccat
gagggcttcctccacaaagccatcagctcccatctgcagacgtgtggctgctccgtcgtg
gtcggaagcaacccagagaaagtaaacaagatcgtccggactctctgcctgttcctgact
ccagctgagaggaagtgttcccgcctctgccgggccagctcctccttcaagtacgacacg
ggtctgttcgtccagggactcctgaaggactccacgggcagcttcgtgctgccgttccgc
caggtgctgtacgcgccgtacccgaccacgcacatcgacgtggacatcaacaccgtgaag
cagatgccgccgtgccacgaacacaccttcaaccagcggcgctacatgcgctctgagctc
aacgcgctgtggaagaccgatagcgaggacgacatcccgccggaaaccgtgatccacacg
gacgaaaccttcaccccggacctgaacatcttccaggatgtcctgcataccgacacgctg
gtcagatccttcatagacgaggtgttcctgctgaagcccggcctggccctgcggagcgcc
tacctggcccagttcctgctgctgctgcaccgcaaggcgctcacgctgctcaagtacatc
gaggacgagacgcagaaggggaagaagccgttccgggccctccggaacctgaaggccgac
ctggacctgaaggccgagggggacctgaacatcgtcatggcgatggctgagaagctgagg
gccgggcttcactcctttgtgttcgggaagccgttctacaccagcgtgcaggagagggac
gtgctcatgagcttctga
DBGET
integrated database retrieval system
