KEGG   Poeciliopsis prolifica (blackstripe livebearer): 129375625
Entry
129375625         CDS       T09758                                 
Symbol
apaf1
Name
(RefSeq) apoptotic protease-activating factor 1 isoform X1
  KO
K02084  apoptotic protease-activating factor
Organism
pprl  Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl04115  p53 signaling pathway
pprl04210  Apoptosis
pprl05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:pprl00001]
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    129375625 (apaf1)
   04115 p53 signaling pathway
    129375625 (apaf1)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    129375625 (apaf1)
SSDB
Motif
Pfam: Beta-prop_WDR3_1st Beta-prop_WDR5 Beta-prop_THOC3 Beta-prop_IFT122_1st WD40 WD40_Prp19 WD40_WDHD1_1st WDR55 WD40_CDC20-Fz APAF1_C Beta-prop_EML_2 Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_2nd EIF3I Beta-prop_WDR36-Utp21_1st WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 WD40_Gbeta WHD_APAF1 Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 NB-ARC Beta-prop_EML Beta-prop_WDR75_1st CARD Beta-prop_RIG_2nd Beta-prop_WDR41 NBCH_WD40 WDR90_beta-prop_4th DSE1_N Beta-prop_IFT140_1st ASA1 Beta-prop_Aladin CFAP251_N WD40_MABP1-WDR62_1st RMC1_N Beta-prop_WDR19_1st Beta-prop_EIPR1 Beta-prop_TEP1_C Beta-prop_NOL10_N Ge1_WD40 Beta-prop_HPS5 Beta-prop_WDR35_TULP_N Beta-prop_NWD2_C Beta-prop_VPS8 PROPPIN CARD_2 Beta-prop_ACSF4 WD40_RFWD3 Beta-prop_SPT8 AAA_16 WD40_like PAC11 Beta-prop_Nup120_160 Beta-prop_WDR11_2nd AAA_22 NACHT WHD_Dark
Other DBs
NCBI-GeneID: 129375625
NCBI-ProteinID: XP_054910836
LinkDB
Position
Unknown
AA seq 1296 aa
MALQERTRRSLLRLRHQLEQDIKPQDLMDHMISDGVITVNEEEKVRIKPTRKDQAAALIE
LLLRKDDCSFISFYNALVKETYHDLASLLYQDLPGVSFNGRKRSYDSSERIEIILSEGGV
PQRPVVFVSRPELLNQVRKKLDLLQKDAGGWVTVFGMAGSGKSVLAAEAVREQRLIGECF
PDGVHWLSIGQLDKSDLLVKIQSLCFRLEQNLDSQSQHRPPTSLDEAKERLRFLMLRRYP
RSLLILDDIWDSSVLKVFDIHCQILLTTRNRSLTDSVSGAKYEVEVESGLDDRKALEILA
LYTKMNQNALPAEARDIVKECKGSPLVVSLIGALLKDKPNRWDYYLRQLRQKQFKRIRKS
SSYDYDALDQAMAASIEVLPDEHRELYKDLTVLQKDVKIPAKILCVLWDLEPEEVEDILQ
EFVNKSLLFVDNNSRLNLYYLHDLQLDFLVEQNRDQIESLHRKVISQYNHHYREVAPSSG
DEGRFYWIRFLTYHLAKAKMFEELHALMFSLDWVRTKARVMGPAPLINDYMEYGPILDKE
NSEICSQFQEFLSLNGHHLEQRPFPDVVQLALSQPHSSAVYRQAREQALHPINAGKLYFE
LINKSSEENLSRLVIHPHLGSISSACFSHDGTKIASCGASKTVKIFKSTSGQKLLEIQAH
DEEVLCCAFSPDDHLLATCSSDRKVKVWNIQQGKLLRVFEEEHEEQVNYCEFTNMSQRLL
LATCSNDNFQNVKIWNLNKPSSQNTMFGHYKPVNHCCFSPDDAYLSTSSNDGTVKLFQVS
GANEWKTIDVKSFLSESDEVLVKCTTWTADGKSIICAARNAALVFDVQTSDMLLDIKTNR
LSTVQYCHACPASNLLALAFSNYAIELWDLEEKKKRADCSGHLSWVQRVQFSKDGSQLLS
CSDDQTIRLWETEKVHTSSAICLKRDSDVLFNGEEIIVSAADNCNRLQVRDGRTGSVLFQ
SQELPSRIRSTCMCRNPSAVVLGQENGNVQVSGLTASRVLRTIGCRIRQLLTSCREVLLA
VAQCTGRVQVLALPSGKLLATLMGHTKTVLHCQFCQNGQTLITSSEDTTIRVWKWKSGEC
KVLRGHKEQVRCFSLLSDSANGSRLLSWSFDGTVKVWDIESGEKLQDIKAHQGAILSCHV
SPDRCLFATTSADKTTKLWSCESWQCVFTLRGHQDCVRSCRFSWDSKCLATGDDNGEIRI
WSVKDGSLLKVCSQESKDATDSVHGGWVTDLHFSPNNSVLVSIGGYIKWWNVAIGESMQT
FYPTGSALKKIHVSPDFSTFVTIDNIGILYILKRVE
NT seq 3891 nt   +upstreamnt  +downstreamnt
atggcgctgcaggagcggacccggagaagtctgctgcgcttgcgccaccaactggagcag
gacatcaagccgcaggacctcatggaccacatgatcagcgatggtgtgatcaccgtgaat
gaggaggagaaggtccggattaagcccaccagaaaagatcaagctgcagcactgatcgag
ctgctgctgaggaaagatgattgctccttcatttctttctataacgcactggttaaagaa
acataccacgatctggccagtctgctgtatcaagacttaccaggcgtctccttcaatgga
cgaaagcgctcctatgacagctccgaaagaattgaaattatcctgagtgaaggtggcgtt
ccacagaggcctgtggtgtttgtgagcagaccagagctgctgaatcaggtcaggaagaaa
cttgatttgctccagaaagatgccggcggctgggttacagtgttcgggatggccgggtca
ggaaagtctgtgcttgctgccgaggctgtcagagaacagagactcattggagagtgtttc
cctgatggggttcattggctgtccatcggtcagctggacaaatcagacctgctggtgaag
atccagtcattgtgttttcgactggaacagaacctggattcccagtcgcaacaccggccg
cccacctctctggatgaggcaaaggagcgcctgcgcttcctgatgctgcgcaggtatccc
aggtctctactaatcctcgatgacatctgggatagctcagtgctcaaagtatttgacatt
cactgtcaaattcttctgaccaccagaaacagaagcctcactgattctgttagcggtgcc
aagtatgaggtggaagtagaaagtggtctggacgacagaaaggcgctggagatcctggcc
ctgtatactaaaatgaatcaaaacgcgcttcctgcggaggctcgcgacatcgtcaaagaa
tgtaaaggctctcctctggttgtgtctctgatcggcgctctgctcaaagacaaacccaac
cggtgggattactacctccgccagctgcgacagaagcagttcaagcgcataaggaagtct
tcgtcctacgactacgatgccttggatcaggccatggctgcgagcatcgaggttttacca
gacgaacatcgggagctctacaaagacctgactgtgctgcaaaaggacgtcaagatcccc
gcgaagatattgtgtgttttgtgggatctggagccagaggaagtggaagacattctccaa
gagtttgtcaacaaatccctgctttttgtagacaacaacagcagactgaacctgtactac
cttcacgacctccagttggacttcctggtggagcagaaccgagatcagatagagagtctt
cacaggaaggtgataagccagtacaaccatcactacagagaagttgctccgtcctctgga
gacgagggtcgtttttattggatcagatttctcacctatcacttggccaaagccaaaatg
ttcgaggagctgcatgcgctcatgttctcgctggactgggtcaggacgaaggcgagggtt
atgggtccagcacccctcatcaacgactacatggagtacggacccattctggacaaagag
aacagtgaaatctgcagccagttccaggagtttctgtcgctgaacggccatcacctcgag
cagcgtccgttccccgacgtcgtgcagctcgctctgtctcagccgcactcctccgccgtc
tacagacaggctcgggagcaggcgctgcacccgatcaacgctgggaagctctactttgaa
ttaataaataagagcagcgaagaaaatctgtcccgtttggtgatccatcctcacctgggc
tccatctcctctgcttgcttctcccacgatggaaccaaaatcgcttcttgtggagccagc
aaaaccgtgaagatatttaaaagcacatccggtcagaagcttttagagatccaggctcac
gatgaagaagttctctgctgcgccttctcccctgatgaccatcttctagcaacctgctca
agtgaccgcaaagttaaggtgtggaacatccagcaaggcaaactactgagggtctttgaa
gaggagcatgaagagcaggtgaattactgcgagttcaccaacatgtcacagcgcctccta
ctggccacttgctccaatgacaacttccaaaacgtcaagatctggaatctgaacaagccg
tcgtcccagaacaccatgtttggtcactacaagccggtgaaccactgctgtttctctcct
gatgatgcttatttgtccacttcctccaatgacggcaccgttaagttgttccaggtgtct
ggagccaacgagtggaagacgatcgacgtgaagagcttcttgtcagaaagcgatgaagtt
cttgtgaagtgcaccacctggactgcagacggcaaatccatcatctgtgctgccagaaat
gctgctttggtatttgatgtccagacgtcggacatgttgctggatatcaagacgaatcgt
ctgagcacggtgcaatactgtcacgcctgtcctgccagtaacctgctggcattagcattc
tcaaattatgccattgagttgtgggatcttgaagaaaagaagaagcgtgcggactgcagc
ggccacctgagctgggtccagcgggtccagttctccaaagacggctctcagctgctgtcc
tgctccgacgaccagacaatcaggttatgggagaccgagaaagtccacacatcctcggcc
atctgcctgaagagagattcggacgttctcttcaacggtgaggaaatcatcgtgtcggct
gcagacaactgcaacagactccaggtgcgggatggcagaacaggatcggtgctgttccag
tcacaggagctgcccagcagaatccggtcaacatgtatgtgcaggaatccttctgcagtg
gttctgggacaagagaacggaaatgtgcaggtgtcagggctgacagctagtcgggtgctg
aggacgattggctgcaggatccgtcaactgctgacctcctgcagggaggtgttgctggct
gtagctcagtgcacaggcagggtgcaggtgttggcgctgccctcagggaagcttttagcc
actctgatgggacacaccaagaccgtgctccactgccagttctgccagaacggacaaact
ctcatcacctcatcggaggacaccaccatcagggtgtggaagtggaaatcaggcgagtgt
aaagtacttcggggtcacaaggagcaagttcgatgcttctctttgctctccgactcagca
aatggctcgagactgctctcctggtcctttgatggaactgtgaaggtgtgggacattgag
agcggagagaaactacaggacatcaaggctcatcagggagccattctgtcctgtcacgtc
tcgccagacagatgtctctttgcgaccacctctgctgacaagaccactaagttgtggagc
tgtgaatcctggcagtgtgtcttcaccctaagaggtcaccaagactgcgtccgaagctgc
cgtttctcctgggacagcaaatgcctcgctacgggagatgacaacggagagatccgaatc
tggagtgttaaagatggctctttactgaaggtttgttcccaggaaagtaaagacgccact
gattctgtacatggaggttgggtgactgatctgcacttctccccaaacaactctgtgctc
gtttctatcggcggctacatcaagtggtggaacgtggcgataggtgaatccatgcagacg
ttttacccgacaggaagcgccctcaagaagatccacgtgtcgcccgacttctccaccttc
gtcaccatcgacaacatcggtatcctctacatcctaaagagggtagaatga

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