Poeciliopsis prolifica (blackstripe livebearer): 129376784
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Entry
129376784 CDS
T09758
Symbol
smcr8b
Name
(RefSeq) guanine nucleotide exchange protein smcr8b
KO
K23611
guanine nucleotide exchange protein SMCR8
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
129376784 (smcr8b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pprl04131
]
129376784 (smcr8b)
Membrane trafficking [BR:
pprl04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
129376784 (smcr8b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMCR8_C
Folliculin
Motif
Other DBs
NCBI-GeneID:
129376784
NCBI-ProteinID:
XP_054912327
LinkDB
All DBs
Position
Unknown
AA seq
872 aa
AA seq
DB search
MIGSPDLLPFTGSGGFEEEGEEPEVNTLPEEFSVRLSPPHNPWSSAAQFHRDFILVAEFS
EQVGPKPVLTIPNDPKVIGSFDLNHFSVRIMSVDYQASGPGHTASAPPGPRLNFSEDSRV
ILGDSAEDSFAYVHHLTLYDLEARGMVRPFCMAYVCSDQTKLMENFSELSECFSQASDSL
KTGNRQAFSSELQRKLQELEYRRRALLEDTHASTGAGGRADELEALEHLILNHRELLRQV
TSYPNRKLQQPDFLPYDMADLPSEPSSPCLPSIASCRSESLLKPLEELCNFYFLSLVKNQ
LADTERCLRGDRSILRTAHISQLLSRKLKLTNFLFELCCPVDAEEEEEEEEAERVLGNTV
GAVGGQSEKHGVELFSCVEEIQIKMEGGEGGRATPDPSAFTDMMGSVTSSDSIEVLGTEK
SYRSQRGAVVSDSRETRVGTTDVILQHPAGDTGVRRLRASARRANSEDSIEVLSTTESIV
PDDLSAITEEEAEHHTLTNGFEEEEESEDDKVLKEEWMKNTATAGEERAESRGRKELLEE
IMFNVPDKDNSLTEKNNQVHEDKMNKLLQAGDTVESRQKKSRPVFDLPVKMALKSVEAEG
AVRTPSYAPLRLLSVDEFSDCTSFTSSSEPPSPTTFNLTSTCVEKKRKRRRAGLRALRFI
KQLSFSQHAIFCLLIGRPLVIIGGDERLVRKLVDGLRLFLPAPGADGYAVMSCLATSLQL
TDLLTWRLIGIHSASSSVLQSLTQLSRYIALLDLDQKTLRCPSYAGSLVGFLANPHTGIS
RGLTYLLHLESCLTALANRVLLQTFTAASQLHRAIPEEKDSQQAQQLYSSENDFQVMHFL
TDLIAQRHTGHGPPPLRFSYSSVQLHRNTYST
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atgattggctcaccggacctgctgcccttcaccggcagcgggggttttgaggaggaaggc
gaggagccggaggttaacactctgcctgaggagttctctgtccgcctgtcaccgcctcac
aacccctggagctcagcagcccagtttcaccgggactttatactggtggctgaattctca
gagcaggttggtccaaagcctgtcttaacaataccaaatgatccgaaggtcattggctca
tttgacctcaaccacttctccgtccgcattatgtctgtggactaccaggcatccggcccg
ggtcacacagcctctgctccgcctggaccccgcctcaatttcagcgaggactccagggta
atcctgggagactcggcagaagactcgtttgcttatgttcatcacttgaccctgtacgac
ctggaggctcgggggatggtgcgacctttctgcatggcctatgtctgttcggaccagacc
aagctgatggagaacttctctgagctgtctgagtgtttttctcaggcctctgacagtttg
aagactggaaatagacaagcattttcctctgaactgcagagaaagctgcaagagctcgag
tacagacggagggccctgctggaggacacacacgcctccacaggagcaggaggcagagct
gatgagcttgaagctttagagcatctcatcctgaatcacagagagctgcttcgccaggtc
acatcctacccaaacaggaagctccagcagcctgacttcctgccctacgacatggccgac
ctgccgtctgagccatcctctccctgccttccctccatcgcctcctgcaggtctgagtcg
cttctgaagccactggaggagctctgcaacttctacttcctgtccctggtgaaaaaccag
ctagcagacacagagcgatgtctgcgtggcgacaggagcatcctgcgaactgctcacatc
tcacagctactgtccaggaagctgaaacttacaaacttcctgtttgagctgtgctgccct
gtggatgctgaggaggaagaggaggaggaggaagcagagagagtcttggggaacaccgtg
ggagctgtggggggtcaatcagaaaagcatggtgtggagttgttctcctgtgtggaagaa
atacagataaagatggagggaggggaaggtgggagagcgacccctgaccccagcgcgttc
acagacatgatgggcagcgtgaccagcagcgacagtattgaggttctcgggacggagaag
tcgtaccggagtcaacgtggagccgttgtgtctgacagcagagaaactcgtgtcgggacg
acagacgtgattctccagcatccagcaggagacacaggcgttcggcgcctcagagcctct
gccaggcgtgccaacagcgaggacagcatcgaggttctcagcacgactgagtccatcgtc
cctgacgacctgtctgccatcacagaggaagaggcggagcatcacactctgaccaatgga
tttgaggaagaggaagagtcagaggatgataaagtcctcaaggaggagtggatgaagaac
actgctactgctggggaggaaagggcagaatctcggggaagaaaagaacttttggaggaa
ataatgttcaatgttccagacaaagacaattcactcacagagaagaataaccaagtccat
gaagacaagatgaataaactgctccaagctggagacacagtggagtcaaggcagaagaag
tcgaggccggtgtttgacctccctgtaaaaatggctttgaaaagcgtcgaggcggaggga
gctgtgcgcacgccgtcctatgctcctctgaggttgctcagcgtggacgagttctctgac
tgtaccagcttcaccagcagctcagagccaccatctcccaccacattcaacctcaccagc
acatgtgtggaaaagaaaagaaagaggaggagagctggcctgcgagccctcaggtttatc
aagcagctctccttctcccagcatgccatcttctgtctgctgattggccggccgctggtt
atcattggaggagacgagcggctggtaaggaagctggtggacggcttgaggctcttcctg
ccagctcctggtgctgatgggtacgctgtgatgtcatgtttggccacgtccctccagctg
actgacctgctcacctggaggctcataggaatacacagtgcatcatcttccgtccttcag
tctctgactcagttgagtcgttacatcgctctgctggacctggatcagaagacgctgcgc
tgtccttcatatgccggatccctagttggcttcctagccaaccctcacaccggcatcagc
cgcggcctcacctacctgctgcacctggagagctgcctgactgcgctggccaaccgggtg
ctgctgcagaccttcaccgctgcttcccagcttcacagagccattcccgaggaaaaggac
tcgcagcaagcacaacaactctatagcagtgaaaatgattttcaagtgatgcactttctg
actgacctgatcgcgcagcgccacaccggacatggaccgccgcctctcaggttttcctac
agctcagtgcagcttcacaggaacacatattcaacataa
DBGET
integrated database retrieval system
