Poeciliopsis prolifica (blackstripe livebearer): 129377770
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Entry
129377770 CDS
T09758
Name
(RefSeq) LOW QUALITY PROTEIN: transient receptor potential cation channel subfamily M member 4-like
KO
K04979
transient receptor potential cation channel subfamily M member 4
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pprl04040
]
129377770
Ion channels [BR:
pprl04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
129377770
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSDAT_euk
Ion_trans
LSDAT_prok
Toxofilin-like_dom
Motif
Other DBs
NCBI-GeneID:
129377770
NCBI-ProteinID:
XP_054913893
LinkDB
All DBs
Position
Unknown
AA seq
1262 aa
AA seq
DB search
MKNTGEVRGSTDKLSKSEKDQTWIAKIYKKRVCTTFVEDSFSNGALCQCGGARDAHSSVA
LGDYFSTAIVNRWDSAQHSSEYPTDAFGEVQFAGASKRHSHFLRLSSDSQPNLVYTLMTT
HWHLPTPNLVVSVVGGEGRTKVKTWVREVLRQGLVKAAQRAGAWIFTTGLREGVGRCVGE
AVRDHATAASSDSLNKVVAVGVAPWGIVHNREQLVNPKGSFPAKYYVQNPTRDSCSLDNN
YQSFLLVDDGSVGRRGGDKVFRTKLEDHISHQRTGIWGSGTIDIPVLCMLISGDTSSLER
MDLSLKNSMPWLVLAGSGGLADFLTDLLENVSVFQSTGEGDGEPGPSVDLKEKVAERVKK
HFPAETESDKLVERALRVYQCRDLISIHYGEQESPTDFDTVLLKALVGASKQRASDEASP
YNEELKLAVAWNRVDIAKSELFNGDIQWKYEDLKESMSDVLINDKPQFVQLFTENGLNIT
EYLTYGRLEQLYRTVPDSTLLYQLLQRQLVFRLGTAPTVPAASSEPKSPLKAAEEIFQSG
PTTDITLFEISGVLDLLMGDTCQPFYYDVLGISDIGSKRKAVKRVSKLLRDNRSYQDKRC
LYPWASLFIWAVLQNRTEMATFFWEMAGESVLTALSGCKMLREMSKLESETEIKLSMKDL
AQTFENLAHDIFSSCYRSDESRSFDLLIRKSPVWGSTTCLQMGMGADARLFFSHDGVQSF
LSHIWWGDMKSNTAVWKLLLTFFCPFLCYTKLISFREDGNQQEEEGRSSVEDLSQDVDNH
YGTTVFSFSDIKHIEADRVGSSPIGGVLEPFRPPRRPFIVSRWRQFWFAPVTAFLGNVLM
YFVFLILYAFVLLLDFREPPPSGLAASEYVLYFWVFTMICEEIRETFFSGVTTWRQTLRV
YIQDVWNKFDLLAISLFISGLICRMFTWTYEYGRELLCVDFMVFTLRLIHIFAIHKQLGP
KIIIVGKMMKDIFFFXFFLGVWIMAYGVANQALLYRHDPNFDRIFRRVFYRPYLHIYGQI
PVEEVDVKKAWDVECTDNLTLVAEGAEQCRNPSGNWLVVILLMVYLLVTNILLINLLIAM
FSNTFTEVQANSEFYWKFQRYNLIVQYHSKPSLAPPFIIFSHLNLFIRRKIRKVPSVKVQ
HFVLQLDLKAANRLMTWETIQKEDLLTAQNKIQKSSDSERLKRMSAKMDSVAKHMTENRD
LDQRLRVLEIEMENCSNALRWIVDTLAQGGAFEPPRPPPTFRDGVPSSSSSSQLSLNDRK
GK
NT seq
3789 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaataccggagaagtgcgaggaagcacagacaagctgagtaaatctgagaaagac
cagacttggatcgccaaaatctacaagaaacgagtgtgcaccacctttgtggaggactcc
ttcagtaacggggcgctgtgtcagtgtggaggggcgagagacgcccactcctccgtggcg
ctcggggactacttcagcacggccattgtgaaccgctgggacagcgcccagcactcgtct
gaatacccgaccgacgcttttggagaggttcagtttgcaggagccagcaagagacacagc
cattttttgcgcctgtcgtcggacagccaaccaaatctggtctacaccttgatgacgacc
cattggcatcttcccaccccaaacctggtggtttctgttgtgggtggagagggcagaacg
aaggtgaagacctgggtacgagaagtcctcaggcagggacttgtgaaagcagcgcaaaga
gcaggagcgtggatctttacaacaggactgcgtgaaggcgtcggcaggtgtgttggcgag
gcggtgagagatcacgccactgcagcttcctccgactccctcaacaaggtggtggccgtg
ggcgtcgctccatggggaatagtgcacaacagggagcagctcgtcaacccgaagggcagc
tttcctgcaaagtactacgtacagaacccaactcgggattcctgctctctggacaacaac
taccagtccttcctgctggtggacgatgggagtgtgggccgcagaggaggagacaaggtc
ttcagaaccaaactggaggaccacatctcccatcagcgcacaggaatatggggtagcgga
acaattgacatccctgttctttgtatgttgatatcaggagacacaagcagtttagagcga
atggatctgtcgctaaagaactccatgccctggctggtgctggccggctcaggaggcctg
gcagacttcctcactgacctcctggagaacgtgtcagtcttccagtccaccggtgaaggc
gacggcgaacctggtcccagtgtggatctgaaagaaaaagtcgcagagcgagtcaagaag
cactttcctgcagaaacggagagcgacaaacttgttgagcgtgctctccgcgtttaccaa
tgcagagacttgatttcaatccactacggagagcaggagagtcccacagactttgacaca
gtcctcctcaaggcattggttggcgcaagtaagcagcgtgcgtcagacgaggccagtccg
tacaatgaagaactgaaactagctgttgcatggaacagggttgacattgccaagagtgaa
cttttcaatggagacattcaatggaagtatgaggatctgaaggaatccatgtcagatgtc
ctgatcaatgataagccccagtttgtgcagcttttcactgagaatggtctaaacatcacc
gaatacctgacctacggcagactggaacagctctaccgcaccgttcccgattcaacgctg
ttgtatcagctgcttcagcgtcagttagtgttcagactgggaactgcaccaacagtgcct
gcagcaagtagcgagccaaaatcacctttgaaagcggcagaagagatctttcagagcggg
ccaacgacagacatcacccttttcgagatttcaggagtcctggatttattaatgggtgat
acctgccagccgttctactatgatgttttgggcatttcagacatcggctctaaaaggaaa
gctgtcaagcgtgtcagtaagctactgcgtgacaatcgctcatatcaggacaagcgctgc
ctctacccctgggcttcgctcttcatctgggccgttctgcagaaccgcactgagatggcc
actttcttctgggagatggcaggagagtcggtgctgacggctctaagtggctgcaagatg
ctgagagaaatgtccaagctggagtctgaaactgaaatcaaactctccatgaaagatctg
gcccagacgtttgagaatctggcacacgatatcttcagctcttgctatcgcagtgatgaa
agtcgttccttcgatctgctgattaggaaatctcctgtttggggaagcaccacctgcttg
cagatgggcatgggcgccgacgcacgcctcttcttcagccacgacggcgtacagtcgttt
ttgtcccacatctggtggggcgacatgaagagcaacacggcggtgtggaagctactgctg
acctttttctgccctttcctctgctacacaaaactaatttctttcagggaagacggaaac
caacaggaagaggaaggaaggagcagcgttgaagacctgagtcaggatgtggacaatcac
tacgggacaaccgtcttctctttctctgacatcaaacacattgaagctgacagggtgggc
tccagtcccatcggaggcgtcctggaacccttcagaccgccgcggcgcccattcatagtg
tcccgctggcgccagttctggttcgctcccgtcacggcgtttttggggaacgtcttgatg
tacttcgtgtttctcatcctgtatgcgtttgtgctgctgctggacttcagagagccgccc
ccgtcaggtctggccgcgtcggagtatgtgctctacttctgggttttcactatgatttgt
gaggagattagagagactttcttttcaggggtgacgacttggcgtcagacgctcagagtt
tacattcaagatgtgtggaataaatttgaccttcttgctataagtcttttcatctcagga
ttaatctgcaggatgtttacatggacttatgagtatggaagggaactcctgtgtgtggac
ttcatggtcttcacccttcgtctcattcacatttttgccattcacaaacagctgggacca
aaaattatcattgttggcaaaatgatgaaagacatcttcttcttcnccttcttcctggga
gtttggatcatggcgtacggagtggccaatcaggctttgctttaccgccacgacccgaat
tttgatcgcatctttcgcagagttttctacaggccgtacctgcacatctacggccagatt
cctgtggaggaggtcgatgttaaaaaagcttgggatgtagaatgcaccgacaacctgaca
ttggttgcggaaggcgctgagcagtgcagaaatccctccggcaactggttagtggtcatt
ctgctgatggtttacctcctggtgaccaacatcctgctcatcaatctgctcatcgccatg
ttcagcaacacgttcactgaagtccaggccaacagcgagttttactggaagttccagcgc
tacaacctgattgtccagtatcactccaagccgtcactggctcctccgtttatcatcttc
tcccacctcaatcttttcatcaggaggaagatccgtaaagttccctctgtcaaggttcag
cacttcgttttgcagttggatctgaaggctgccaacagactgatgacgtgggaaacgatc
cagaaggaagacttgctgaccgcccaaaacaaaatccagaaaagcagcgactcagagagg
ctgaaacggatgtctgccaagatggacagtgttgctaaacatatgactgaaaacagagac
ctggaccagaggcttcgggttctggagattgagatggagaactgctcaaatgctctgaga
tggattgttgatactttagcacagggtggcgcgtttgaaccacccagaccaccaccgacg
tttagagatggcgttcccagttcttccagttcatcgcagctgagccttaacgaccgaaaa
ggaaagtga
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