Poeciliopsis prolifica (blackstripe livebearer): 129377822
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Entry
129377822 CDS
T09758
Symbol
irf3
Name
(RefSeq) interferon regulatory factor 3
KO
K05411
interferon regulatory factor 3
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl04620
Toll-like receptor signaling pathway
pprl04621
NOD-like receptor signaling pathway
pprl04622
RIG-I-like receptor signaling pathway
pprl04623
Cytosolic DNA-sensing pathway
pprl05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
129377822 (irf3)
04621 NOD-like receptor signaling pathway
129377822 (irf3)
04622 RIG-I-like receptor signaling pathway
129377822 (irf3)
04623 Cytosolic DNA-sensing pathway
129377822 (irf3)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
129377822 (irf3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pprl03000
]
129377822 (irf3)
04131 Membrane trafficking [BR:
pprl04131
]
129377822 (irf3)
Transcription factors [BR:
pprl03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
129377822 (irf3)
Membrane trafficking [BR:
pprl04131
]
Autophagy
Other autophagy associated proteins
TRIM-directed selective autophagy
129377822 (irf3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IRF
IRF-3
Motif
Other DBs
NCBI-GeneID:
129377822
NCBI-ProteinID:
XP_054913981
LinkDB
All DBs
Position
Unknown
AA seq
465 aa
AA seq
DB search
MAHSKPLLIPWLKSSIDSERYPGVHWTNPEQTEFCIPWKHALRQDSSNEDVLIFKAWAEA
SGSGRAQGDASVWKRNFRSALRAKGFKMVSDNKNDAANPHKVYRWPEESASGARSSSGSQ
EQEDANVLNGYNPQGSGVVPFFDGPVFNPEDILMPERPDGQDILQECLRGLNIGPGAEGT
TGFQPPTEQQQLQNQLLIGALPLPGQQQDPVMFEGAAREAGLPEQPAGPAGGAAAEGAGY
GDGQQAAQFLETVNQTRDGDHFKTHFRVAVFYRGVKVSEQKVPNEAGLRLVYRPDLNDAV
LDHETGLSIVSLPRPVGILDQTQTCLTQRILDNLGSLEVGMSQHVIYGQRHGEVKAFWSF
SKFDSSRQPREISKLNPERLYPVKDFIRGLMEFFDGKESPPSSMFFCLGEKWPDPENRPW
EKKLIMVEVVPTSMELLKNLAVECGASSLRSVELQMSLEEMMDLY
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atggctcactcaaagcccctgctgatcccgtggctcaagtccagcatcgacagtgagagg
tatccgggtgtccattggaccaaccctgagcaaaccgagttctgcatcccatggaaacac
gcgctgagacaggactcctccaatgaggacgttctcatctttaaggcctgggcggaggcg
agcgggagcggccgggctcagggagacgcctcggtctggaagaggaacttccgcagcgcc
ctgagagcgaagggcttcaaaatggtgtccgacaacaagaacgacgccgccaacccacac
aaggtctaccgctggccggaggagtcggcgtcaggagcccgatcttcctctggatcccag
gagcaagaagacgccaatgttctgaacggctataatccgcaggggagtggggtcgtgcca
ttctttgacggacctgtttttaatccagaggacattctgatgccagaacgccccgacggc
caggatatcctccaggagtgcctgagaggcctgaatatcggccctggagcagagggcacc
acaggctttcagcctcctactgagcaacagcagctgcagaatcagctcctgattggtgcg
ctcccgttgcccgggcaacagcaggatccagtgatgtttgagggtgcagcccgtgaagcg
gggttgccagagcaaccggcaggtccagcggggggggcggcggcggagggggcgggctac
ggcgacgggcagcaggcagcgcagttcctagaaacggtgaaccagaccagagatggagat
catttcaagactcatttcagggtggctgtgttctacagaggggtgaaggtgtctgagcag
aaggttcccaacgaggccggactccgcttagtgtacaggcccgatctaaacgatgcggtt
ttggatcacgagacgggcctctccatcgtctctctgccgcgtccggtcggcatcctggat
caaacccaaacctgcctgacccaaaggatcctggacaacctggggagcctggaagtgggc
atgtcgcagcacgtgatctacggccagcggcacggcgaggtcaaagccttctggagcttc
tccaagtttgacagcagcagacagccgagggagatttctaaactgaatcctgaacgtctt
tacccggtgaaggacttcatccgaggattaatggagttttttgacgggaaggaatcccca
ccgtcctccatgttcttctgtctcggggaaaagtggcctgacccggaaaacaggccttgg
gagaaaaaactcatcatggtggaggtggttcccacttctatggagcttctgaagaaccta
gctgttgagtgtggcgcctcctcgctgcggtctgtggaactgcagatgtcactggaggaa
atgatggatctttactga
DBGET
integrated database retrieval system
