Poeciliopsis prolifica (blackstripe livebearer): 129379881
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Entry
129379881 CDS
T09758
Symbol
trpc5a
Name
(RefSeq) short transient receptor potential channel 5a
KO
K04968
transient receptor potential cation channel subfamily C member 5
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pprl01009
]
129379881 (trpc5a)
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pprl04040
]
129379881 (trpc5a)
Protein phosphatases and associated proteins [BR:
pprl01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
129379881 (trpc5a)
Ion channels [BR:
pprl04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
129379881 (trpc5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_3
Ank_5
Ank_4
PKD_channel
YVC1_C
LHD_TRPY1
Motif
Other DBs
NCBI-GeneID:
129379881
NCBI-ProteinID:
XP_054916793
LinkDB
All DBs
Position
Unknown
AA seq
1070 aa
AA seq
DB search
MNPMTQLYYKKATYSPYRDRIPLQIVRAEVELSAEERAYLTAVEKGDYAGVKHALREAEV
YYNMDVNCLDPLGRSALLIAIENENLEIMELLLDHGIHTGDALLYAIRKEVVGAVELLLS
HRRPSGEKQVPSLMMDSQFSEFTPDITPIMLAAHTNNYEIIKLLVQRKVTIPRPHQIRCD
CVECVSSSEVDSLRHSRSRLNIYKALASPSLIALSSEDPILTAFRLGWELKELSKVENEF
RQEYEELSQQCKRFAKDLLDQARSSRELETILNHRDNDQSEELDPRQCHDLAKLKLAIKY
HQKEFVAQPNCQQLLATLWYDGFPGWRRRHWAVKLVTCFIIGLLFPVFSLIYLLAPKSAL
GRFIKKPFIKFICHTASYLTFLFLLLLASQHIARTNLHMQGPPPTIVEWMILPWVLGFIW
AEIKEMWDGGFTEYIHDWWNLMDFAMNSLYLATISLKIVAYVKYNSSRPREEWEMWHPTL
IAEALFAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLN
QLYFYYETKASEEPNNCKGIRCERQNNAFSTLFETLQSLFWSIFGLLNLYVTNVKARHEF
TEFVGATMFGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFDEGGT
LPPPFNIIPSPKSFWYLLMWLHNKLCRRGQPPGEASHKCGNLREFTERHADSLIQNQHYQ
EVIRSLVKRYVAAMIRSAKTDEGLTEENFKELKQDISSFRYEVLDLLGNRRPPRRHYSSS
SETTKDDGAMASEDDSESGDGPGGGEGGGGGVGVQKSKSVTFSDTVEDDRRPAPTLGVSA
LVRSISGMTRIDKAEEGRLEDRVGWGEDEEDEEGKPKSNGLKTAVMPPSSTNVLPSPSSS
FSSSLSSSLARTRSRLHRLSSPSAKSDSFKRLSYLFSRSKRKAPPMPLPLQSPPSYTISD
GLLRPLGSHSHSDFGLSDVTRSDTHLNEVGRSVDAPSFSPLRTNGRDSLLTLPLPPPCPC
QSLHCASNMSESSSRLLDSSEDVFQGGVGPCDDVLEDSCDVIEDSVTTQL
NT seq
3213 nt
NT seq
+upstream
nt +downstream
nt
atgaatccaatgacacagctgtactacaaaaaggcgacatattcgccgtatcgcgaccgc
atccctcttcagatcgtccgagctgaagtggagctgtcagccgaggagcgggcctacctc
accgctgtggagaaaggtgactacgccggggtgaaacacgccctccgcgaggccgaggtt
tactacaacatggacgtgaactgtctggacccgctgggccgcagcgcgctgctcatcgcc
atcgagaacgagaacctggagatcatggagctgctgctggaccacggcatccacacgggc
gacgccctgctgtacgccatcaggaaggaggtggtgggcgccgtggagctgctgctgtcg
caccggaggccgagcggcgagaagcaggttccctccctgatgatggacagccagttctca
gagttcacccccgacataactcccatcatgctcgctgctcacaccaacaactacgagatc
atcaagctgcttgtccagcgcaaggtcaccatcccaaggccgcaccagatacgatgcgac
tgcgttgagtgtgtttccagttcagaggtcgacagccttcgacattcccggtctcgactc
aacatctacaaggcgctggcgtcgccgtcgctcatcgcgctgtccagcgaggatcccatc
ctcactgctttcagactgggctgggaactcaaagagctgagcaaggtggagaacgagttt
cgccaggagtacgaagagctttcccagcagtgcaaacgattcgccaaagacctcctggat
caggccagaagttcccgcgagctggagaccatcctgaaccacagagacaacgaccagagc
gaggagctggaccccaggcagtgccacgacctggccaagctcaagctcgccatcaagtac
caccagaaggagtttgtcgcgcagccaaactgccagcagctgctggccactctgtggtac
gacggtttcccaggctggaggagacgacactgggccgtcaaactggtgacctgcttcatc
atcgggctgctgttcccagtcttctcactgatctacctgttggccccaaagagcgctctg
gggcgcttcatcaagaaacccttcatcaagttcatctgccacaccgcgtcctacctgacc
ttcctcttcctcctgctgctggcgtcgcagcacatcgcccgcaccaacctgcacatgcag
ggacccccacccaccatcgtggagtggatgatccttccctgggtgctgggtttcatctgg
gcagagatcaaggagatgtgggacgggggattcacagagtacatccacgactggtggaac
ctaatggactttgccatgaactccctctacctggccaccatttctctgaagatagtggct
tacgtcaagtacaactcctctcgtcccagggaggagtgggagatgtggcacccgacgctg
atcgccgaggctctgttcgccatcgccaacatcttcagctcgctcagactcatctccctc
ttcacggccaactcccacctcggccctctgcagatctctctggggaggatgctgctggac
atcctcaagtttctcttcatttactgtctggttctgttagcgtttgctaacggactcaac
cagctgtacttctactacgagaccaaggcttcagaagaacccaacaactgcaaggggatc
cgctgcgagaggcagaacaacgccttctccacgttatttgagactctccagtcgctcttc
tggtccatatttgggctgctcaacctttacgtcaccaacgtgaaagctcggcacgagttc
accgagttcgtcggggcgacgatgttcgggacgtacaacgtcatctctctggtggttctg
ctgaacatgctcatcgccatgatgaacaactcctaccaactcatcgctgaccacgccgac
atcgagtggaagtttgcccgcaccaagctgtggatgagctacttcgacgagggcggcacg
ctgccccctcccttcaacatcatccccagcccaaagtccttctggtacctcctgatgtgg
ctccacaacaagctgtgcaggagaggccagccgcccggagaggcctcgcacaaatgcgga
aaccttcgagagttcaccgagcgccatgctgacagcctgatacagaaccagcattaccag
gaagtgatccgaagtctggtgaagagatacgtggccgccatgatacgaagcgccaaaact
gatgaagggctgacagaggaaaacttcaaggagttgaagcaggatatctccagtttccgc
tacgaagtcctggatctcctcggcaaccggcgtcctccccggcgacactactcttcatcc
agcgagacgacaaaagacgacggtgccatggcgtcagaggatgacagcgaatcaggtgac
ggccctggaggaggagagggcggaggaggaggcgtcggagtccagaagtcgaagagcgtc
accttctccgacacggtggaggacgacagaaggccagcgccgacgctcggcgtgtctgcg
ctggtgcgctccatttcaggaatgacgcggatagacaaagcagaggaggggaggctggag
gacagagtggggtggggagaagacgaggaggatgaggaggggaagccaaaaagcaacggg
ctaaagacggccgtcatgcctccgtcctccaccaatgtcctcccctcgccatcgtcgtca
ttttcctcttcgctatcgtcatcgcttgctcgcacaaggagccgcctgcaccgcctctca
tccccaagcgcaaagtcagactctttcaaacgcctctcctacctgttctcccgctccaaa
cgcaaagccccacccatgccgctgcctctccagtccccgccctcgtacaccatctccgac
gggctgctccgccccctcgggagccacagtcactccgacttcggactcagcgacgtcacc
agaagcgacactcacctgaacgaagtgggtcgctcggtggacgcgccgtcattctcgccg
ctgagaacgaacgggcgggactcgctcctgacgcttcccctcccgccgccgtgcccctgc
caatccctgcactgtgcttccaacatgtctgagtccagctcgcgactgctggactccagc
gaggacgttttccagggaggggtgggaccatgtgacgatgtcttagaggacagctgcgat
gtcatagaggactctgttaccacgcagctatag
DBGET
integrated database retrieval system
