Pimephales promelas (fathead minnow): 120459799
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Entry
120459799 CDS
T08155
Symbol
rapgef4a
Name
(RefSeq) rap guanine nucleotide exchange factor 4 isoform X1
KO
K04351
Rap guanine nucleotide exchange factor 4
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04081
Hormone signaling
pprm04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
120459799 (rapgef4a)
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
120459799 (rapgef4a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pprm04131
]
120459799 (rapgef4a)
Membrane trafficking [BR:
pprm04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
120459799 (rapgef4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RasGEF
cNMP_binding
DEP
RasGEF_N
RA_2
RUNDC1
Motif
Other DBs
NCBI-GeneID:
120459799
NCBI-ProteinID:
XP_039503194
LinkDB
All DBs
Position
Unknown
AA seq
1025 aa
AA seq
DB search
MISPKMVATHSSSHPSSSAEWIICLDKSREERSGEDVDIILARLKSVKAFEKFHPNLLQQ
ICLCGFYECLEKGITLYRQGDIGTNWYTVLSGSLDVKVSETANHQDAVTICTLGIGTAFG
ESILDNTPRHATIVTREFSELLRIEKREFRTLWENYRQCMAGLLVPPYGVMDSVPNADRM
PDKENLSNSSPGSSSKHLKKKLLIQSPIKHHPKSITQVPSEKILRAGEVLRNIILFRAPQ
MIRDRKYHLKTYRRCCMGTELVDWLLQHTSCVHSRVQAVGMWQVLLEEGVLNHVDQELSF
QDKYLFYRFLDDETEEAPLPNEEEQKESDEELQDTLLLLSQIGPDAHLRMILRKLPGQRT
VDDLEIIYEELLHIKALSHLSTTVKRELAGVLIFESHAKAGTVLFNQGEEGTSWYIILKG
SVNVVIYGKGVVCTLHEGDDFGKLALVNDAPRAASIVLREDNCHFLRVDKEDFNRILRDV
EANTVRLKEHEEDVLVLERSNNRSSTSSPLKYTVMSGTPEKILEHLLETVKLDSQFTEPD
PALDDFLLMHCVFVPNGQLCPLLMAHYHAEASQGSEQERMDYTLNNKRRVIRLVLQWAAI
NTDHLQEEDSSYNFLQEFYETVCEDSRLIPALKDQLPELEKIIKQTSEDGRPSQKKHKVL
LRQFSPGNDRLQKRQPIKSTDEILFKVYCSDHTYSTIRVPVAASVREVVSAVTDKLGSGD
DLLLIHLNSAGDKELLKPSDVSIFSTLSINGRLFVCSRDQIDTLTPLPEQEGPSAGSMST
FELMSSKDLAHHMTLYDWELFDCVHEHELIYHTFGRPHFKKTTANLDLFLRRFNEVQLWV
VTEVCLCPTLSKRVQLLKKFIKIAAHCKEFKNLNSFFAIIMGLGNPAVCRLSQTWEKLPS
KFKKFYGEFENLMDPSRNHRAYRLTMAKLEPPIIPFMPLLIKDMTFTHEGNKTFTDRLVN
FEKMRMIANTVRIMRYCRSQPFNQEAPQVTGKSHQDVRGYVRHISVIDNQRTLSQLSHRI
EPRRS
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
atgatttcaccgaagatggttgcgacacactcctccagccacccgtcctcttccgcggag
tggattatctgtctggataagagtcgagaggagcgttcgggggaggatgtggacattatc
ttggcccgtctgaaaagtgtgaaggcctttgagaagttccaccctaatctccttcagcag
atctgtctgtgtggcttctatgaatgtctggagaaaggcataacattatacaggcagggt
gacatcggcactaactggtacactgtcctgtctggttctctggatgtcaaagtctcagaa
acagcaaaccatcaggatgccgtcaccatctgtacattgggcatcggcacagctttcggc
gagtccattctggataacacgccccggcacgccaccattgtcacccgggagttcagtgaa
ctattgcggattgagaagagggagtttaggaccctgtgggagaattaccgtcagtgtatg
gctggtctactggtccctccctatggtgttatggatagtgtcccaaatgctgacagaatg
cctgacaaagagaatctgagcaacagttcacccggatcatcatccaaacacttaaaaaag
aaattattaattcaaagtcccatcaaacatcaccccaaatccattactcaggtgccgtca
gaaaagatcctacgggcaggtgaagtgttacgaaacatcattttgttccgagcacctcaa
atgatcagagacaggaagtaccacctaaaaacatacaggcggtgctgtatgggcacagag
cttgttgattggctgttacagcacacttcctgtgtgcactctcgtgttcaggcggtgggg
atgtggcaggtgctgctggaggagggagtcttaaaccatgtggaccaggagctgagtttc
caagataagtatttgttttatcggttcctggacgatgagacagaggaggcacccctcccc
aatgaggaagagcagaaagagagtgacgaagaactgcaggacacccttctgctcctctct
cagatcggacctgacgcccatctaagaatgatcctgcggaaactgcctggccagaggaca
gtagatgacttggagatcatttacgaggagctgctgcatattaaagccttatcacatctc
tccaccactgtgaagagggaactagctggtgttctgatatttgagtcgcacgcaaaagca
ggcacagtgttgtttaatcaaggggaagaggggacgtcatggtacatcatcctgaagggc
tccgttaacgtggtgatctatggaaagggtgtagtctgtacgttgcatgagggagatgac
ttcgggaagctggctctggtgaacgacgctcctcgagcagcgtctatcgtactgagagag
gacaactgccacttcctgagagtggacaaagaagacttcaacaggatcctcagggatgtg
gaggcaaacactgtccgtctgaaggaacatgaggaggatgtgttagttttggagaggagt
aacaacaggagctccacttcttctcctctcaagtacactgtgatgtcaggaactccagag
aagattctggaacatcttctggagacggtgaaacttgactcccaattcacagagccagac
cctgctctggatgacttcttacttatgcactgtgtttttgtcccgaacggtcagctgtgt
ccgctgctcatggcccactatcacgctgaggcgtcccagggcagtgaacaggagcgcatg
gattacacactcaataacaagcgcagggtgattcgtctggtgttacagtgggccgccatc
aacacagaccatctacaggaggaggacagctcctacaacttcctccaggagttttatgag
accgtgtgtgaagattccagactcattccagctctcaaagatcaactgcctgaactagag
aagatcataaagcaaacctccgaagatggtcggccctctcaaaaaaagcacaaagtcctc
ctgcgtcagttcagccccgggaacgacagactgcagaagagacagccgatcaaaagcaca
gatgagatcctcttcaaggtttactgcagtgatcacacctactccactatcagagtgcct
gtcgctgcgtctgtcagagaggtcgtctccgcggttaccgacaaactggggtcaggagat
gatcttcttctcatccacctcaactcggccggagataaagagcttctaaagccatctgac
gtgtccatcttctcaactctgagtattaatggccgtttgtttgtctgctcgagggaccag
atcgacactttgactccactgccggagcaggagggcccgtctgcagggtccatgtccacg
tttgaactcatgagctctaaagatctggctcatcacatgacactttatgactgggagctc
ttcgactgtgtacatgagcacgagctgatctaccacacatttggccgtccgcatttcaag
aagacgacggcgaacctggatctgttcctgcggaggttcaatgaggtgcagctctgggtg
gtcactgaggtttgcttgtgtcccacgctcagcaaacgcgtacaactgctcaagaagttc
atcaagatcgcagcacactgtaaagagtttaagaatctgaactccttctttgccattatc
atgggcctgggaaaccctgcagtctgtcgactcagtcagacatgggagaaactgcccagc
aagttcaagaagttttatggagagtttgagaacctgatggatccctccagaaatcacaga
gcatatcggctgacaatggccaagttagagccgccgatcatccctttcatgcctttgtta
attaaagatatgactttcacacacgagggcaacaagacatttaccgacagactggtcaac
tttgagaaaatgagaatgattgctaacacagtccgaatcatgagatactgccgaagtcag
cccttcaatcaagaagcgccacaggtgacgggtaaaagccatcaggatgtgcgtggctat
gtacgtcacatcagtgtgattgacaaccagcgcacgctatcccagctgtcccaccggatc
gagccgcgccggtcctga
DBGET
integrated database retrieval system
