Pimephales promelas (fathead minnow): 120460042
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Entry
120460042 CDS
T08155
Symbol
trpc6b
Name
(RefSeq) short transient receptor potential channel 6
KO
K04969
transient receptor potential cation channel subfamily C member 6
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pprm04040
]
120460042 (trpc6b)
Ion channels [BR:
pprm04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
120460042 (trpc6b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRP_2
Ion_trans
PKD_channel
Ank_2
Ank
Ank_4
Cas8b_C
TT_ORF2-like
Motif
Other DBs
NCBI-GeneID:
120460042
NCBI-ProteinID:
XP_039503602
LinkDB
All DBs
Position
Unknown
AA seq
879 aa
AA seq
DB search
MITSTIPSERLFRAPVIHEDSKQMSTDHTSVHQRMNTDFEKNPLPRFYKRWSNDDIQRHS
LAKSRRMAMRRPAYMFNARYSSLTSIEERFLEAAEYGNIPVIRRMLEELPEINVNCVDYM
GQNALQLAVANEHLEVTELLLKKENLARIGDALLLAISKGYIRIVEAILAHQAFADTTKL
TSSPLQTETHDDFFAYDEDGTRFSHDITPITLASHCHEYEIVHILLRKGARIVRPHDYFC
KCNSCLYHQRHDSFSHSRSRINAYKGLASPAYLSLSSEDPVLTALELSNELGVLANIEKE
FKNDYKMLSMQCKDFVVGLLDLCRNTEEVEAILNGDTETGGHFDKSGRPNLVRLKLAIKY
ELKKFVAHPNCQQQLLSIWYENLSGLRQQTTAVKLLVVLGVVVGLPILALLYWIAPSSKM
GKIIRGPFLKFVAHAASFTIFLGLLIMNAADRFEGTTLLPNMTIHDHPSQLFRMKITPFT
WMEMLIISWVVGMIWAECKEIWYQGPREYLLEPWNLLDFGMLAIFVTSFIARFMAFWHAN
VAQSYVDKRYTDLSNITLPLEIEYYRLARVHWVPSDPQLISEGLYAIAVVLSFSRIAYIL
PANESFGPLQISLGRTVKDIFKFMVIFIMVFVAFMIGMFNLYSYYRGAKQNGAFTTVEES
FKTLFWAIFGLSEVKSVIINNGHKFIENIGYVLYGVYNVTMVIVLLNMLIAMINNSFQEI
ENDADVEWKFARAKLWFSYFEEGGTLPVPFNLIPSPKSVLSLAMKLKQLLLIPLHRHKED
LKEDTELSESGKQNESSEKNSPHTSSRYQRIMKRLIKRYVIKAQTDKEGDEVNEGELKEI
KQDISSLRYELLEEKSRQTEELADLVRRLGDRLTSQQKL
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atgatcacatctactattcctagtgagcggctctttcgtgcgccagtgattcatgaagac
agcaaacagatgtccactgatcacacttctgttcatcaacggatgaacaccgactttgaa
aagaatcctttaccacgcttttacaagaggtggagcaatgatgacattcaaaggcactca
ttggctaagagccggcgcatggctatgcgaagaccggcctacatgtttaacgcccgttac
agtagtctgacctcaattgaagagcgtttcctagaggcagctgagtatggaaacattcct
gtcatccgtaggatgctggaagaacttccggaaattaatgtcaactgtgtggactacatg
ggccagaatgcattgcagcttgcagttgccaatgagcatctagaagtgacagaactgttg
ctgaaaaaagagaacctggccaggataggtgacgctttgcttttagccataagtaaagga
tatattcgtattgtggaggccattttggcccaccaagcctttgcagacacaaccaaactc
acgagcagccccctccagacagagacacacgacgacttctttgcctatgatgaggatggt
actcggttttcccatgatattacacccattacactagcctctcattgccacgaatatgag
attgtgcacattctgctaaggaagggtgcccgcattgtacggccacatgactacttctgc
aaatgcaacagctgcctttatcaccagaggcatgattcttttagccattcacgttccaga
atcaatgcctacaaagggctggctagccctgcctacctatccctgtccagtgaggaccca
gtactgacggctctagagcttagcaatgaactgggtgtactagccaacatagaaaaagag
tttaagaatgattataagatgctgtccatgcaatgtaaggattttgtagttggacttctg
gatctgtgtcggaatacagaggaggtggaagccattttaaatggagacacagagacaggt
ggccactttgacaagagtggccgacctaatctagttcgattaaaactggccatcaaatat
gagctgaaaaagtttgtagcccatccaaactgccaacagcagcttttgtccatatggtat
gagaatctgtctgggctcaggcagcagaccacagctgtcaagttacttgtggttttgggg
gtggtggttggacttcccatcctggccttactgtactggatagcaccctcaagcaagatg
gggaagatcatacgtggtcctttcctaaaatttgtggcacatgcagcttctttcacaatc
tttcttggccttctcatcatgaacgctgctgaccgttttgaagggacaactctcttacca
aatatgaccatccacgaccacccctcccaattgttccgcatgaagatcacaccttttact
tggatggaaatgctgatcatatcctgggtcgtaggaatgatttgggctgaatgtaaagag
atatggtatcagggtcctcgggaatatctgctggagccttggaacttgctggactttgga
atgttggccatttttgtgacttccttcatcgctagatttatggcattttggcatgcaaat
gttgcacagagttacgtcgacaagcgctacacagatctgtcaaacattaccttgcccctt
gagatagaatactatcgtcttgctcgtgtccactgggttccttcagaccctcagctgatc
tccgagggcctttatgccatagcggtggttctgagcttctctcggattgcgtacatcctg
ccggcaaatgagagctttgggcctttgcagatctctctgggcaggactgtgaaagacata
tttaaattcatggtgatcttcataatggtgtttgtggccttcatgattggaatgtttaac
ctctactcgtactatcgtggagcaaagcaaaacggtgccttcacaactgttgaggagagc
tttaaaactttgttctgggctatttttggactttctgaggtcaaatctgtcatcatcaac
aacgggcacaaattcatcgagaatattggctatgtactctatggagtctacaacgttacc
atggttatagtcttgctcaacatgctcatcgccatgatcaacaactcctttcaggaaatt
gagaacgatgcagatgtggagtggaagtttgccagggctaagctgtggttctcttacttt
gaggaaggagggactctgcctgtgccgtttaacctcattcccagcccaaaatcagtcctc
agcctggctatgaaactcaaacagctcctgctaatacccctccacagacacaaggaggac
ctgaaggaggacacagagctcagtgagtcgggtaaacaaaatgagtccagtgagaagaat
tcacctcatacatcaagtcgctaccagaggatcatgaaacggctaatcaaacgatatgtg
atcaaagcacagactgacaaagagggcgatgaagttaatgaaggagaactaaaggagata
aagcaggacatctcaagtttgcgctatgagctcctggaggagaagtcccgtcagacagag
gagctggcagacctggtcaggagactgggagacaggctgaccagtcaacagaaactgtag
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integrated database retrieval system
