Pimephales promelas (fathead minnow): 120460947
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Entry
120460947 CDS
T08155
Symbol
smad5
Name
(RefSeq) mothers against decapentaplegic homolog 5
KO
K16790
mothers against decapentaplegic homolog 5
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04081
Hormone signaling
pprm04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
120460947 (smad5)
09133 Signaling molecules and interaction
04081 Hormone signaling
120460947 (smad5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MH2
MH1
IRF-3
Motif
Other DBs
NCBI-GeneID:
120460947
NCBI-ProteinID:
XP_039504931
LinkDB
All DBs
Position
Unknown
AA seq
465 aa
AA seq
DB search
MTSMSSLFSFTSPAVKRLLGWKQGDEEEKWAEKAVDALVKKLKKKKGAMEDLEKALSSPG
QPSKCVTIPRSLDGRLQVSHRKGLPHVIYCRVWRWPDLQSHHELKPLEVCEYPFGSKQKE
VCINPYHYKRVESPVLPPVLVPRHSEFNPQHSLLVQFRNLSHNEPHMPLNATFPESFQQH
SGGSSFPISPNSPYPPSPASSGTYPNSPASSGPSSPFQLPADTPPPAYMPPDEQMGQDGS
QSMETGNSSMVPQNMPRGDVQPVEYEEPSHWCSIVYYELNNRVGEAYHASSTSVLVDGFT
DPSNNKNRFCLGLLSNVNRNSTIENTRRHIGKGVHLYYVGGEVYAECLSDTSIFVQSRNC
NYHHGFHPTTVCKIPSGCSLKIFNNQEFAQLLAQSVNHGFEAVYELTKMCTIRMSFVKGW
GAEYHRQDVTSTPCWIEVHLHGPLQWLDKVLTQMGSPLNPISSVS
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgacctccatgtccagtctgttctccttcaccagcccggcggtgaagcgattgctggga
tggaagcagggtgacgaggaggaaaaatgggcggaaaaggctgtggatgccctagtgaag
aaactaaagaagaaaaagggtgccatggaggacttggaaaaggcccttagcagtcctggg
cagcccagcaaatgtgtgaccatcccccggtcgctggacgggcggctacaggtgtcccac
aggaaaggcctccctcacgtcatctactgccgtgtgtggcgctggcctgaccttcagtcc
catcatgagctcaaacccctcgaggtgtgcgaatatccgttcggctccaaacagaaagaa
gtgtgtatcaacccatatcactacaaaagagttgaaagtccagtgcttcctccagttttg
gtgccacgacacagcgagttcaaccctcagcacagtcttctagtgcagttccgcaacctg
agtcacaatgagcctcacatgcctctaaacgccacctttccagagtctttccagcaacac
agcggagggagctccttccctatctctccaaactcgccctaccctccgtctccggccagc
agtggtacctaccccaactctcctgcaagctctgggccatccagccccttccagctccca
gctgatacccctcctcctgcctacatgcctccagatgagcagatgggacaggacgggtct
cagtccatggagactggcaatagcagtatggttcctcagaacatgcccagaggggatgtg
cagccagtggagtatgaagagcccagtcattggtgctctattgtgtactatgagctgaat
aatcgtgtgggagaggcttaccacgcttcctccaccagcgttctggttgatggattcacc
gacccatccaacaacaagaaccgcttctgcctgggcctgctctctaatgtcaatcgcaac
tccaccattgaaaacacccgccgccacattggcaaaggtgtccacctgtattatgtcgga
ggagaagtgtatgcagagtgtctgagtgacaccagcattttcgtccagagtcggaactgc
aactaccatcatggcttccatcccacaactgtctgcaaaatccccagtggctgcagcctc
aagatcttcaacaaccaagagtttgctcagctgcttgctcaatctgtcaaccatggtttt
gaggccgtctacgagctcaccaagatgtgcaccattcgcatgagctttgtaaagggctgg
ggcgcagagtatcacagacaagacgtgacgagcaccccttgctggatagaagtgcatctc
cacggccccctccagtggctggataaagtccttacacaaatgggttctcctctgaacccc
atctcttctgtctcataa
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