KEGG   Pimephales promelas (fathead minnow): 120460969
Entry
120460969         CDS       T08155                                 
Symbol
ran
Name
(RefSeq) GTP-binding nuclear protein Ran
  KO
K07936  GTP-binding nuclear protein Ran
Organism
pprm  Pimephales promelas (fathead minnow)
Pathway
pprm03008  Ribosome biogenesis in eukaryotes
pprm03013  Nucleocytoplasmic transport
pprm03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:pprm00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    120460969 (ran)
   03008 Ribosome biogenesis in eukaryotes
    120460969 (ran)
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    120460969 (ran)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pprm03019]
    120460969 (ran)
   03009 Ribosome biogenesis [BR:pprm03009]
    120460969 (ran)
   03016 Transfer RNA biogenesis [BR:pprm03016]
    120460969 (ran)
   03036 Chromosome and associated proteins [BR:pprm03036]
    120460969 (ran)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pprm04147]
    120460969 (ran)
   04031 GTP-binding proteins [BR:pprm04031]
    120460969 (ran)
Messenger RNA biogenesis [BR:pprm03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     120460969 (ran)
Ribosome biogenesis [BR:pprm03009]
 Eukaryotic type
  Pre-40S particles
   Export and cytoplasmic maturation factors
    120460969 (ran)
  Pre-60S particles
    120460969 (ran)
Transfer RNA biogenesis [BR:pprm03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    120460969 (ran)
Chromosome and associated proteins [BR:pprm03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     120460969 (ran)
   Spindle formation proteins
    120460969 (ran)
Exosome [BR:pprm04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   120460969 (ran)
GTP-binding proteins [BR:pprm04031]
 Small (monomeric) G-proteins
  Ran Family
   Ran
    120460969 (ran)
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU MMR_HSR1 G-alpha RNA_helicase Gtr1_RagA Pox_A32 ArgoMid AAA_24 AAA_7 Septin TsaE AAA_22 DUF5906 AAA_16 SRPRB
Other DBs
NCBI-GeneID: 120460969
NCBI-ProteinID: XP_039504966
LinkDB
Position
Unknown
AA seq 215 aa
MAENEPQVQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGAIKY
NVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVRVCENIPIVLCG
NKVDIKDRKVKAKSIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKLIGDPNLEFVEMPA
LAPPEIAMDPSLAAQYEHDLKVASETALPDEDDDL
NT seq 648 nt   +upstreamnt  +downstreamnt
atggcagagaacgagccacaagttcagtttaagctggttctggtgggagatggaggtacg
gggaaaaccacctttgtgaagagacatttgactggagagtttgaaaagaaatatgttgcc
acacttggagttgaggtacatcccctggtcttccacacaaacagaggagccatcaaatat
aacgtatgggacacagccggacaagagaagttcggaggcctgagagatggatattacatc
caggctcagtgtgcaatcatcatgtttgatgtaacttcccgagtgacctataaaaacgtg
cccaactggcatcgtgacttggtgcgtgtgtgcgagaacattcccatagtgctgtgcggt
aacaaagtggacatcaaggacaggaaggtcaaagcaaagagtatcgttttccatcgcaag
aagaatctacagtactatgacatctctgccaagagtaattataactttgagaagcccttc
ctgtggctcgcacggaaactgatcggagatcctaatctggagtttgttgagatgccagcc
ctcgcaccacctgaaattgctatggacccatcacttgctgcacagtatgagcatgacttg
aaagtggcatcagaaacagctctcccagatgaagatgacgacctttaa

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