Pimephales promelas (fathead minnow): 120461659
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Entry
120461659 CDS
T08155
Symbol
polk
Name
(RefSeq) DNA polymerase kappa
KO
K03511
DNA polymerase kappa [EC:
2.7.7.7
]
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
120461659 (polk)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pprm03400
]
120461659 (polk)
Enzymes [BR:
pprm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
120461659 (polk)
DNA repair and recombination proteins [BR:
pprm03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
Y-family DNA polymerases
120461659 (polk)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IMS
IMS_C
IMS_HHH
SAM_BAF
Motif
Other DBs
NCBI-GeneID:
120461659
NCBI-ProteinID:
XP_039505806
LinkDB
All DBs
Position
Unknown
AA seq
899 aa
AA seq
DB search
MEDHHHQEDAAVSVSSSGADLLSRIALNDNKAGMEGLDRDKINKVILETSKGSKFYENEL
KKERQVNQRIEKMMEQKAKITKEQMKQAQAEVDKLKCELERGRDLGRVIVHVDMDAFYAA
VEMRDCPELKDKPMAVGSMSMLSTSNYHARRFGVRAAMPGFIAKKLCPNLVIMPTNFDKY
RAVSAQVREIFSEYDPHFMPVSLDEAYLDITEHLEQRKLWPETMRTHHMCDAKTDNDAGR
FAGESEKDGLSPVLFEDSPCSSTSLSGAEGKAEVFGTSAEEAVREMRFRIEQKTSLTASA
GIAPNMMLAKVCSDKNKPNGQYRIPPEKQVVMEFMKNLPVRKVSGIGKVTEKMLAALGIV
SCAQLGQQMALLSLLFSETSWHHFLHISLGLGSTYIERDSERKSMSTERTFGEMSDAEEQ
YSLCRELCHDLAQDLQREGLKGKTVTLKLKNVNFEVKTKAFTLQYAVCMEEDIFAAAKDL
LKVEIDSVSPQPLKLRLMGVRVSGFISVENKKPLQRSIMGFLQKGGSDTGSFTQCSGSAL
KAGGDRDSASFLKPQSAEIKVPSVSEQIPKSTGPKQQSFFQRAQSKRLQQQQEQISVINS
GTDTTNNSADTAASTLPITNSQSDTALTNTNSGTDVTGYINKQATSKPSFKISTQVLQFL
TCPVCNREMKDVNLTAFNHHIDECLKGSAMDNEHTYSDAVEQNEELNSEPPASSHNLSCN
GEKPSTSIFLPVVETDDGNDFKTPFFSHRTKINEKRSVVPNKKRPLSESSSKASHTTHNP
EAVVTELSPDLKGSSLTCPVCSQLQSTGDLALFNRHVDMCLNQEVLLEFRGSDPSVDHSD
TPALKSVRGQLGDQGRVSKEREKSKRQGSSALPPAKKTKVLSTKHTIDKFFKGNTRQNI
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
atggaggatcatcatcatcaggaggatgctgctgtgagtgtgagcagctctggagcggat
ctactctccaggatcgctctcaatgacaacaaggctggcatggagggactggacagagac
aagatcaacaaagtcattttggaaacctccaagggatctaaattttatgaaaatgaactt
aagaaggagcggcaggtgaatcagcgcattgaaaaaatgatggagcaaaaagcaaaaatc
actaaagaacagatgaagcaagcacaagcagaggtggacaaactaaaatgtgaactggag
aggggtcgagatctaggccgtgtgatagttcacgtagacatggacgcgttctatgctgct
gtagaaatgagagactgcccagagctaaaggacaaaccgatggcagtggggtccatgagc
atgctgtcaacctccaattaccacgccaggaggtttggtgtccgtgctgccatgccaggg
ttcattgcgaagaagctctgtccaaacctagttatcatgcccaccaactttgacaaatac
agagcagtgagtgcccaggtacgggagatattctctgagtatgaccctcatttcatgcct
gtgagtctggacgaggcttatctggacatcactgagcatctggagcagcggaagctctgg
ccggagaccatgcgaacacatcacatgtgtgatgccaagacagataatgatgcaggaagg
tttgcgggtgaatcggaaaaagatggactgtctcctgtgctgtttgaggacagtccctgc
tcctcgacctctctgtcaggagctgaagggaaagctgaagtgtttgggacaagtgcagag
gaggctgtgagggagatgcgcttccgtattgagcagaaaacgtctcttactgccagtgca
ggtattgccccaaacatgatgcttgcaaaagtatgcagtgacaagaacaagcccaatggc
cagtaccgaattcctcctgagaaacaagttgtgatggagtttatgaagaatcttccagtc
agaaaggtgtctggtattggaaaggtgactgagaagatgctggctgctttgggcattgtc
agctgtgctcaacttggccagcagatggcgttactttccctgcttttttcggaaacctct
tggcatcatttccttcacatatctttgggtttgggctccacatatattgagagagactct
gaaagaaaaagcatgagcactgaaaggacgtttggggagatgagtgatgcagaagagcaa
tattccctgtgtagggagctctgtcatgacctagcacaggacctacagcgagagggcctt
aaggggaaaactgttactttaaagttgaagaatgtcaactttgaagtgaagactaaagca
tttacactgcagtatgctgtctgtatggaggaggacatctttgctgctgccaaagacctt
ctcaaagttgagattgacagtgtcagccctcagccactaaagctaagactcatgggcgtt
cgagtgtctggctttatcagcgttgaaaataaaaagcctcttcagaggagtataatgggg
ttccttcagaaaggtggatctgatacaggcagtttcacacagtgttctggatctgctctc
aaagcaggaggagacagagatagtgccagtttcctaaagccgcagtccgctgagataaaa
gtaccttctgtgtctgagcaaatacccaaatctacaggacctaagcagcagtcctttttt
caaagagcgcagtcaaaacgacttcaacagcagcaggaacaaatatctgtcatcaactct
ggtacagacacaacaaacaatagtgctgacacagctgcttcaactttgccaataacaaac
tctcaatcagacacagcattaacaaacacaaactcggggacagacgtaacaggatacata
aataaacaagcaacttcaaagccatcgtttaaaatctcaacccaagttctgcagtttctc
acctgccctgtgtgcaacagagagatgaaggatgtaaacctcacagccttcaaccaccat
attgatgaatgtctgaagggcagtgcaatggataatgaacacacatattcggatgcagtt
gagcaaaatgaagagctcaacagtgaaccacctgcatcaagccacaacctgtcctgtaat
ggagagaagccgtccactagcatctttttgccggtggtggaaactgatgacggaaatgat
ttcaagactccattttttagtcacaggacaaaaataaatgaaaagcgttcagttgttcct
aataagaagaggcctctttctgaatctagttctaaagcctcacacacaacacacaatcct
gaggctgttgtcacagagttgtcacctgacttgaaaggctcgtctttgacgtgccccgtg
tgcagtcaactgcagagcaccggtgacctcgctctcttcaaccgccatgtggatatgtgt
ctcaaccaagaagttctgctggagtttagaggttctgatccttctgtggatcattcagat
acgcctgcactcaagagcgtaagaggccaattgggggaccagggcagagtttctaaagag
agagaaaagagtaaaaggcagggatcatctgctcttcctccagcaaagaaaaccaaagtg
ttgagcacaaaacacacaattgacaagttcttcaaaggaaacaccagacaaaacatctaa
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