Pimephales promelas (fathead minnow): 120462049
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Entry
120462049 CDS
T08155
Symbol
nr1h4
Name
(RefSeq) bile acid receptor isoform X1
KO
K08537
farnesoid X receptor
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pprm03000
]
120462049 (nr1h4)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
pprm03310
]
120462049 (nr1h4)
Transcription factors [BR:
pprm03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
120462049 (nr1h4)
Nuclear receptors [BR:
pprm03310
]
1. Thyroid hormone like
1H. Liver X receptor like receptor
120462049 (nr1h4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
120462049
NCBI-ProteinID:
XP_039506411
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All DBs
Position
Unknown
AA seq
483 aa
AA seq
DB search
MNEWVGHDVNVVGPLQIPTSDAFPLSEGSHFFDILAEQNSPLLHDQEVMPFTSYPSMQYT
TVEPPMSSPSYYSNQHCYSQYSGEEWYSTSNVFEMRKGPLEGSFDNELDESCPVVPIACK
RSRHAAHSGRSKGEELCVVCGDKASGYHYNALTCEGCKGFFRRSITKNAVYKCKSGGNCE
MDMYMRRKCQECRLRKCKEMGMLAECLLTEIQCKSKRLRKNTKASSDESIGDDVGDSRDA
KQVVSTTKLSKENIELSQDQQALISYIVDAHNKHRIPQDMAKKLLQEQFNTEENFLLLTE
MATSHVQVLVEFTKNIPGFQSLDHEDQIALLKGSAVEAMFLRSAQVFTKKLPNGHTEVLE
DRIRRSGISEEFMTPMFNFYKSIGELQMMQEEHALLTAITILSPDRPYVKDQQAVERLQD
PMLEVLRKVCKLQHPQEPQHFARLLGRLTELRTLNHHHAEMLESWRMSDHKFTPLLCEIW
DVQ
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgaatgagtgggtgggccatgacgtcaatgtggtgggacctttacagatcccaaccagc
gatgcattccctctatcagagggctcacacttttttgatattctggcagagcagaacagt
cctttgctacatgaccaggaagtcatgcccttcaccagctatcccagcatgcagtacacc
acggtggagccccccatgtcatcaccatcatactactccaatcagcattgctactcacag
tacagtggggaggagtggtactctacatccaatgtgtttgagatgagaaaaggaccgttg
gaaggcagctttgataatgagctcgacgagtcttgccccgtagtcccgattgcgtgtaaa
aggtccagacacgcagcacactccggaaggagcaaaggcgaagaactgtgcgttgtctgt
ggagataaagcatcaggatatcactacaatgccctcacatgtgaaggatgcaaaggtttc
ttcagaaggagtatcacaaagaatgctgtatataaatgtaagagtggaggaaactgtgag
atggacatgtacatgcgcaggaaatgccaagagtgtcgactcaggaagtgcaaagagatg
ggcatgctcgcagaatgcttgttaacagaaatccagtgcaaatccaaaagactgaggaaa
aacacaaaagcctcatctgacgaaagtataggggatgatgttggagatagtagagatgct
aaacaggttgtatctaccacaaaactctccaaggaaaatatagaactgagccaagaccag
caggctttaataagttatatagttgatgctcacaacaagcatcgcatccctcaggatatg
gcaaaaaagctgctacaagagcaatttaacacagaagaaaacttccttctactgaccgaa
atggcaactagtcacgtccaggtgctggttgagttcacaaaaaacataccaggttttcag
tctctggatcacgaagatcagatcgctttattgaaaggttccgccgtagaggccatgttc
ctgcgttcggcccaggttttcaccaagaaactgcccaacggacacacagaggtgctggag
gacaggatcagaaggagcggaatatctgaagagtttatgacacccatgtttaacttctat
aaaagcattggagagctgcagatgatgcaagaggaacatgctttacttactgctatcaca
atcctctcaccagacagaccgtatgtaaaagaccagcaggcagtggagcgtctgcaggat
cccatgttggaggtgctgaggaaggtctgtaagctacagcatcctcaggagccccagcac
tttgcaaggcttctcggtcgtctcactgagctacgcaccctcaaccaccaccacgccgaa
atgctagagtcatggcgcatgagtgaccacaagttcacccccctcctctgtgagatctgg
gacgttcagtga
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