KEGG   Pimephales promelas (fathead minnow): 120462132
Entry
120462132         CDS       T08155                                 
Symbol
rbx1
Name
(RefSeq) E3 ubiquitin-protein ligase RBX1
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
pprm  Pimephales promelas (fathead minnow)
Pathway
pprm03420  Nucleotide excision repair
pprm04110  Cell cycle
pprm04114  Oocyte meiosis
pprm04120  Ubiquitin mediated proteolysis
pprm04141  Protein processing in endoplasmic reticulum
pprm04310  Wnt signaling pathway
pprm04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:pprm00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    120462132 (rbx1)
   04120 Ubiquitin mediated proteolysis
    120462132 (rbx1)
  09124 Replication and repair
   03420 Nucleotide excision repair
    120462132 (rbx1)
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    120462132 (rbx1)
   04350 TGF-beta signaling pathway
    120462132 (rbx1)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    120462132 (rbx1)
   04114 Oocyte meiosis
    120462132 (rbx1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pprm04121]
    120462132 (rbx1)
   03400 DNA repair and recombination proteins [BR:pprm03400]
    120462132 (rbx1)
Enzymes [BR:pprm01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     120462132 (rbx1)
Ubiquitin system [BR:pprm04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   120462132 (rbx1)
  Multi subunit type E3
   SCF complex
    Ring finger protein
     120462132 (rbx1)
   Cul2 complex
     120462132 (rbx1)
   Cul3 complex
     120462132 (rbx1)
   Cul4 complex
     120462132 (rbx1)
   Cul7 complex
     120462132 (rbx1)
   Cul8 complex
     120462132 (rbx1)
   Cul9 complex
     120462132 (rbx1)
DNA repair and recombination proteins [BR:pprm03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      120462132 (rbx1)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      120462132 (rbx1)
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11 zf-RING_16
Other DBs
NCBI-GeneID: 120462132
NCBI-ProteinID: XP_039506565
LinkDB
Position
Unknown
AA seq 108 aa
MAAAMDVDTPSGANSGASKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQ
ASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH
NT seq 327 nt   +upstreamnt  +downstreamnt
atggcggctgcgatggatgtggacaccccgagtggagctaacagtggagccagtaagaag
cgttttgaagtgaaaaagtggaatgcagtggctctgtgggcttgggacattgtggtggac
aactgtgccatttgtagaaatcacattatggacctctgtatagagtgtcaggccaatcag
gcatcagctacatcagaggagtgcacagtggcctggggtgtctgcaatcatgcgtttcat
ttccactgtatctctcgctggctgaagaccagacaggtgtgtcccctggacaacagagag
tgggagtttcagaagtatggccattag

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