Pimephales promelas (fathead minnow): 120464120
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Entry
120464120 CDS
T08155
Symbol
babam2
Name
(RefSeq) BRISC and BRCA1-A complex member 2
KO
K12173
BRCA1-A complex subunit BRE
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
120464120 (babam2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pprm04121
]
120464120 (babam2)
03036 Chromosome and associated proteins [BR:
pprm03036
]
120464120 (babam2)
03400 DNA repair and recombination proteins [BR:
pprm03400
]
120464120 (babam2)
Ubiquitin system [BR:
pprm04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
120464120 (babam2)
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
BRISC complex
120464120 (babam2)
Chromosome and associated proteins [BR:
pprm03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
120464120 (babam2)
DNA repair and recombination proteins [BR:
pprm03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
120464120 (babam2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRE
Motif
Other DBs
NCBI-GeneID:
120464120
NCBI-ProteinID:
XP_039509400
LinkDB
All DBs
Position
Unknown
AA seq
386 aa
AA seq
DB search
MNSLSPEVALSRISPELRPLLCTVVRNGRVGLDSSGCLRITDLKTGCTSLMPGPCCDRFK
LHIPYAGETLKWDIIFNASDPELPPDFIFGEDADFLPEPSELPHLVSWDAGKPECLLQLV
KELLQQYHQYQCQRLRDSSRLLFEYDSLLDDPNYGRSMEIYAGRKNSWTGEFSARFLLKL
PVDFSNIPIYLLKDTALDPGEDVALLSVSFEDAEATQVFPKLYLSPSIEHALGGSSALHI
PAFPSGGCLIDYVPQVCQLLTNKVQYVIQGYHKRREYIAAFLSHFGMGVVEYDAVGFTKL
TLLLMWKDFCFLVHVDLPLYFPRDQPTLTFQSIYHFTSSGQLYSQVQKSYPYSPRWDGNE
MAKRAKAYFKSFIPQFQEGAFANGKL
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgaacagtctgtctccagaagtggcgctgagccggatctctccggagctgcggccgtta
ctctgcaccgtggtgcgcaacggacgggtcgggttagactcctctggctgtctccggatc
actgacctcaagactggctgcacatcactaatgcctggtccttgctgtgacagatttaaa
cttcatatcccatatgctggagagactctcaaatgggacatcatctttaatgcgagtgac
ccagaactgccccctgactttatcttcggagaagatgctgacttccttcctgaaccgtct
gagctcccgcacttggtgtcgtgggatgcgggtaaaccggagtgtctcctgcagctggtg
aaagagctgttacagcagtaccatcagtaccagtgccagcggctgcgcgacagctcccgt
ctgctcttcgaatacgacagcctgctggacgaccctaactatggacgcagtatggagatc
tacgccggccgcaagaatagctggacgggggagttttctgcgcggttccttctcaaactc
cctgtggatttcagcaacattcccatctatcttctcaaggacacagcactggatccagga
gaggatgtggcgcttctttctgtaagctttgaagatgctgaagccacacaggtctttccg
aaactctacctatctcccagcattgagcatgcacttggagggtcttcggcattacatatc
ccagcattccccagtggaggctgcctcattgactacgtgcctcaagtgtgccaattactc
acaaacaaggttcagtatgtcattcaaggatatcacaagaggagagaatacatcgctgcc
tttctcagtcactttggaatgggggtggttgagtatgatgctgttgggtttaccaagctc
acccttctgctgatgtggaaagacttttgcttcctggtccatgtggacctgcctttatac
ttccctcgagatcaacccaccctcacgtttcagtcgatctatcacttcaccagcagtggg
cagctgtactctcaggtgcagaagtcttacccctacagtccacgctgggacggcaacgag
atggccaaacgagccaaggcttacttcaagagctttatccctcagttccaggagggggct
tttgccaacggtaaactgtag
DBGET
integrated database retrieval system
