Pimephales promelas (fathead minnow): 120464381
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Entry
120464381 CDS
T08155
Symbol
pkp1b
Name
(RefSeq) plakophilin-1
KO
K10387
plakophilin 1
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pprm04812
]
120464381 (pkp1b)
Cytoskeleton proteins [BR:
pprm04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
120464381 (pkp1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Arm
Arm_2
Atx10homo_assoc
RIX1
ELMO_ARM
PIR2-like_helical
Motif
Other DBs
NCBI-GeneID:
120464381
NCBI-ProteinID:
XP_039509776
LinkDB
All DBs
Position
Unknown
AA seq
732 aa
AA seq
DB search
MMPEPLKSALSIGTVEDTSLALPSDQSARSAQQRVLDQVHTIKRSKSKYSSKSVSGLPSP
TSPETDSVFYDFKFSPGASFSRGGTMTNGNMQRQTFVRKSTNSRSSSAQRVTSNASRGDR
PLFSNSGTLPVQARSSNQLYSYKATRSAPDLGFQPAVNGGGVGATQRSQTAKQTFRMEKA
FSQPNQAFGNGTFGRMTNSNQVGSFQAVSRRPSSLQSNAESRTSMIRNGQVKDISGMNAE
KLMADLTMQEAVDFLFSPDENYQQCGAAYIQHSTFTDDKAKQEVLTLKGIQPLVNLLSSP
SPQIQETVAAALRNAVFKNQANKEEVQRCGGIPQAVQMISDTNSETQKHLTGLLWNLSSA
DNLKPDLLRTALPALTEKVIVPFTASLDDNANTSLAPEAFYNATGCLRNLSSSKLVNRQA
MRNCKGLIDSLMRYSEYCVNAGMPDNTSLENCVCILHNLTYQLETEMPSLFTKINMLASH
ARDRSSPSDAGPIGCFSSQSQKLQQESGFDYPVIEDNNPKGTGWLFHSKALQMYLNLLSS
SERPATLEASCGALQNLTANEGLVSNVLSHTIVQKLNGLKYISPLLQSSNPALQNSAVAL
LGNLSRSTRTNKTMARQTLPQLVGFLNSGLTKGDSSPEHDSTMATALHSAHSLLKADPEI
GKSLLNNGLINSLNNMSLNLGLPKSSAAAGVLLHSLWSEKSFQSFLKKQGMNKKSFVNDI
TSAAFKSFQVVD
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgatgcccgaacctttaaaatcggctctttcgataggaactgtggaggacacgtcgctc
gcgctcccgtccgatcaatccgcgagatccgcgcaacagagagtcctggaccaggtgcac
actatcaagaggagcaagtccaaatacagcagcaagagtgtgtccggcctcccctcaccc
accagtcctgaaactgacagtgtgttttacgacttcaagttttctcccggagcctcgttc
agcagaggaggaaccatgaccaatgggaatatgcaaaggcaaacctttgtgcgcaagtcc
accaactcccgcagctccagcgctcaacgggtgaccagtaacgccagcaggggagatcgg
cccttgttctccaattctggcaccctcccggtccaggcacggtccagtaaccagctgtac
agctataaagccactcgcagcgccccggacctgggcttccagcccgcagtgaacggtgga
ggagtcggagccactcaacgcagccaaaccgccaaacagaccttccggatggagaaggcc
ttcagtcagcctaaccaggctttcgggaacggcactttcggcagaatgaccaacagcaat
caggtcggctccttccaggccgtcagcagacgcccgtcttccctgcagtccaacgcggag
tccaggacctctatgatcaggaatggacaagtcaaggatatttctgggatgaatgcggag
aagcttatggccgatttgacgatgcaagaggcggttgactttctgttcagcccggatgag
aactaccagcagtgtggagcggcttacatccagcacagcaccttcaccgacgacaaggcc
aagcaagaggtgctgaccctgaagggcattcaaccgctggtcaacctgttgagcagtccc
agtcctcagatccaggagacggtggccgctgccctgagaaacgccgtcttcaaaaaccag
gccaataaagaagaagtgcagcgctgtggaggaatccctcaggctgtgcagatgatcagc
gataccaactctgagacacagaaacacctgacaggtctcctgtggaatctctcctccgct
gataacctgaagcccgatctgctccgtacggctctgcccgcgctcacggagaaggtcatc
gtgccgtttacagccagcttagacgacaatgccaacacaagcctggctccagaggccttc
tacaacgccacgggatgcctacgcaacctgagctcctccaaactggtaaaccggcaagcc
atgcgcaactgcaaaggtctgatcgactcgctcatgcgctactcggagtactgcgttaat
gcagggatgccagataacacgtctttggagaactgcgtgtgtattctgcacaacctcacc
taccagctggagaccgagatgccgtctctcttcactaaaataaacatgctggcaagtcac
gctcgcgatcgctccagtccttcagacgctggtccgatcggctgcttcagctcccagagc
cagaaactgcagcaggagagcggttttgactatcctgtgatagaggacaacaatcctaaa
ggcaccggctggctcttccactctaaagccctgcagatgtacctcaatctgctgagctcc
agtgagagacccgccacgctcgaggccagctgtggagcgctgcagaacctcaccgccaac
gaaggcttagtgtcaaatgtgttgagtcacacaatcgttcagaagctgaacggcctgaag
tacatcagtccattgctgcagtcgtccaatcccgcgctacagaacagcgccgtcgctctc
ctcgggaatctgtccaggtccacacgcacaaacaaaaccatggcccgtcagactctcccg
cagctggtcggtttcctgaactcggggctcacgaagggcgattcctctcccgaacacgac
agcacaatggcgaccgctctccacagcgcacactccctgctgaaggccgatcctgagatc
ggcaagagtctgctgaacaacggcttgatcaactccctcaacaacatgagtctcaatctg
ggtctgccgaagtccagcgctgcggccggagtcctccttcacagtctgtggtcggaaaag
agctttcagagttttcttaaaaagcaaggcatgaataagaagtccttcgtgaatgacatc
acatcggcagctttcaagtctttccaggtggtcgactga
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