Pimephales promelas (fathead minnow): 120467911 Help Entry 120467911         CDS       T08155                                  Symbol ldlrb Name (RefSeq) low-density lipoprotein receptor   KO K12473   low-density lipoprotein receptor Organism pprm  Pimephales promelas (fathead minnow) Pathway pprm03272   Virion - Hepatitis viruses pprm04144   Endocytosis Brite KEGG Orthology (KO) [BR:pprm00001]  09120 Genetic Information Processing   09125 Information processing in viruses    03272 Virion - Hepatitis viruses     120467911 (ldlrb)  09140 Cellular Processes   09141 Transport and catabolism    04144 Endocytosis     120467911 (ldlrb)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:pprm04131]     120467911 (ldlrb) Membrane trafficking [BR:pprm04131]  Endocytosis   Clathrin-mediated endocytosis    Low-density lipoprotein receptor (LDLR) family proteins     120467911 (ldlrb) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Ldl_recept_a Ldl_recept_b FXa_inhibition cEGF EGF_CA SGL EGF EGF_3 hEGF Vgb_lyase TMEM154 Motif Other DBs NCBI-GeneID:  120467911 NCBI-ProteinID:  XP_039512436 LinkDB All DBs Position Unknown AA seq 840 aa AA seqDB search MEIRISARLGFICSVLLIHCVHGTRAAGCSQEQFRCANGKCITSRWVCDDADDCGDGSDE LLASCREKSCTPGQFSCGGRLNQCVSTRWHCDGKTDCENGADEQGCALKNCTDEEFRCRS GQCVSQAFVCDKDSDCDDGSDEDSCPVPTCSPGSFQCNNSVCVPRLWACDGDADCADGSD EWPQNCPSGAGQKPQPACRGHEFLCGSGECVHGSWRCDGGFDCSDRSDEDNCTSPTCRPD EFPCSDGVCIPGQRYCDGNPDCRDQSDEMDCVTVNRCEEPSRFKCRSGECISADQVCDGK KNCMDWSDEPLKDCNTNECLLNNGGCSHTCNDLKIGYECSCPTGFHLINRTHCEDVDECL DADRCSQICVNLPGSFKCDCNEGFELDHMTKDCKALTGSGAFLLFSTRHEVRKLALGSRE YTSLIRQQKNVAALDVDIANDRIFWSDVSQRKIYSATIADPAHQTTVIDSQISKPEGLAV DWIHGNIYWTDGELQTISVATVDGGKRKTLVSDGLQRPRAIVVDPQHNFMFWTDWGESAR IEKSGLNGADRTPLVTDNIVWPNGITLDVLNQRLYWVDSKLHTLSSIGVNGDGRHTLIFS PQKLPHPLALAVFEEKVFWTDVSNSGIWSANRMTGRDITPVAEHLQSPEDIVLHHSLKQP TGRNWCREAALVNGGCEFLCLPAPQINARSPKYTCACPDHMTLGEDMRMCVSGPNATAPP QVTSRTASRTSVPSQHQRGDATQTGSRRGADAEHEPVSSPSQHPTVLFIAFPVVAVCLLA FAAVMVWRHWRVKNTNTIHFSNPVYQKTTDDTVHIFRSPSLDGYSYPSCQMISMDEDAAA NT seq 2523 nt NT seq  +upstreamnt  +downstreamnt atggagattcggatcagcgctcggctcggtttcatctgctcggttcttctgattcactgt gtccacggaacccgtgcagcaggctgcagtcaggagcagttcaggtgtgcaaacgggaaa tgcatcaccagccgatgggtttgtgacgatgcagacgattgtggagacggaagtgatgag cttcttgcgtcctgccgagagaagtcgtgtacgccgggccagttcagctgcggcgggcgt ctgaatcagtgtgtgtccaccagatggcactgcgacgggaagactgactgcgagaacggc gcagacgagcagggctgcgcgctgaagaactgcacggatgaggagtttcgctgtcgtagc ggtcagtgtgtgtcgcaggcgttcgtctgcgataaggattcggactgtgacgacggcagc gatgaggactcgtgtcccgtccccacctgcagccccggctccttccagtgcaataactcc gtgtgtgtgcctcggctctgggcctgcgacggggacgccgactgcgccgacgggtccgac gagtggccccagaactgcccgtctggagcgggtcagaaaccgcagccggcctgcaggggt cacgagttcctttgtggcagcggagagtgtgttcacggcagctggaggtgcgacggcggc ttcgactgcagcgaccgctcggacgaggacaactgcacttcgcccacgtgccgcccagat gagttcccctgtagcgacggcgtttgcatcccaggacagcgttattgtgacgggaaccct gactgccgggaccagagcgatgagatggactgcgtcaccgtgaacaggtgcgaggagccg agccggtttaagtgtcgcagtggcgagtgtatcagcgcagaccaagtgtgtgacgggaag aagaactgcatggactggtcagatgagcctctcaaagactgcaacactaacgagtgcctc ttgaacaacggcggctgttctcacacgtgcaacgacctgaagatcggatacgaatgctcg tgtccgacaggatttcacctgatcaaccgcacgcactgtgaagacgtggatgagtgtttg gacgctgacagatgctctcagatctgtgtaaacctgccgggcagtttcaagtgcgactgt aatgaaggatttgagctggatcacatgaccaaagactgcaaagctcttacaggatcggga gcgttcctgctcttcagcacgcgtcacgaggtgaggaagctggcgctgggcagcagggaa tacacgtccctgatccgccagcagaagaacgtggcggcgctagacgtggacatcgccaac gacaggatcttctggtccgacgtgagccagagaaagatctacagcgccacgattgctgac cccgcccaccaaaccacagtgattgacagccagatctccaagcccgagggtctggctgtg gactggatccacgggaacatctattggacagatggcgagctgcaaaccatctctgttgcg acggtggacggcgggaaacgcaagacgctagtcagcgacggcctgcagcgacctcgcgcg atcgtcgtggatcctcagcacaatttcatgttctggacggactggggcgagtcggcccgg attgagaagagcggactgaacggtgccgatcggacgcctctcgtcacagacaacatcgtc tggccgaacggcatcacactcgatgtgttgaatcagcgtctgtactgggtcgactcaaag ctacacacactgtccagcatcggcgtgaacggagacgggcggcacacgctgatcttcagc ccacagaagctgccgcatccgctggcgctggccgtgtttgaggagaaagtcttctggacc gacgtgtccaacagcggcatctggagcgcgaaccgcatgacgggccgtgacatcactcct gtggccgaacatctgcagtctcctgaagacatcgtgctccatcacagtctgaaacagcct acaggaagaaactggtgcagggaagcagccctggtcaacggcggctgtgagtttctgtgt ctgccggcgccgcagattaacgcacgttcacccaaatacacgtgtgcgtgtcctgatcac atgaccctgggcgaggacatgaggatgtgtgtgtccggtccgaacgccacagcgccacct caggtgacgtcgagaactgcaagcagaacatctgtgccgtctcaacatcagcgcggagac gccacacagacgggctctcgcagaggagcggatgcagaacacgagccggtctccagccct tcccagcatcccacagtcctgttcatcgccttcccagtcgtggccgtgtgtctgctggcg ttcgccgctgtgatggtttggagacactggcgtgtgaagaacaccaacaccatccacttc tccaacccggtgtatcagaagaccaccgacgacacggtccacatcttcaggagccccagc ctggacgggtactcgtatccatcgtgtcagatgatcagcatggatgaagacgccgccgcc tga

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