Pimephales promelas (fathead minnow): 120468656
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Entry
120468656 CDS
T08155
Symbol
nod2
Name
(RefSeq) nucleotide-binding oligomerization domain-containing protein 2 isoform X1
KO
K10165
nucleotide-binding oligomerization domain-containing protein 2
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
120468656 (nod2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
pprm04054
]
120468656 (nod2)
Pattern recognition receptors [BR:
pprm04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
120468656 (nod2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NACHT
NLRC4_HD2
CARD
WHD_NOD2
LRR_6
LRR_4
AAA_16
nSTAND_NTPase5
AAA_29
AAA_22
Viral_helicase1
AAA_30
AAA_18
T2SSE
Motif
Other DBs
NCBI-GeneID:
120468656
NCBI-ProteinID:
XP_039513136
LinkDB
All DBs
Position
Unknown
AA seq
1003 aa
AA seq
DB search
MSHPFSLVLIVSVDFETRQSSTMSTQLILKQRAELLAVLCGGGSAEPLDCVLDLLLAWEV
LVWEDYLNIRVVEKPLCSNVRQLLDVVYDKGEDACSFFLAAINQILPDEQKVGLCFGNGC
AVVGKNRPDSATLTLLADRPVLVTKLRDNIDEALHALLTTGCFTIKDCDGVQLPVYTPSQ
QVRRLLDQVKFKGETAAKTLLQFLEQTEPTRPNPEEKESHLSADCLLYQTKLRSSVAAQS
LFLSTYGGTGRFSLDDIYTDGLLEVMDGSGETTTLGLEDVVGPIGSLNEDADTILVSGEA
GSGKSTLLQRLHLLWARKALLTNTFLLFSFSCRKLNSEHRELSLKELLFLHCCWPDRSQD
EVFQYILDHPHMVLFTFDGLDEFKHGFTDEERHCCPTKQVPIHVLLFNLLQGTLMKGILK
VVTSRPQAVGPSLKRYLRKEVHLKGFSCRGINCFVKKHHSDPAIARSVIESLQSNTVLLG
LCHIPVFCWIVTKCHRELLGGQDGIPQTITDVYLLVLQHFFKRNSSQPQGVLGKAWLEEH
LNTVLKLGQLALEGLEASCYVFSGYELQRNGLTEQDISMGFLIYCNDLSVTHCKHYEFLH
ITLQCFFAALYVVLTRNNNRSAISRLFQPQYTQWSGLSQRCLGHCIDPSVEEVKTHVAET
PNLQITAQFVSGLFSQRHHNLLLDCCPTAVRERKFKQVVKSLSKGMQRHFKTIPRPVEGE
KKSMHAMPSFVWLIKCIYEMQDNSIAQGAVAKLDVEHLKLTYCNIGPMECTALTYVLKFL
RNPVGLQLDNNSVGDVGVEQLLPCLHICHSLYLRNNNISDEGIRKLLEKGMKCESFQKIA
LFNNKLTDACTKHFAWLLKEKQNFLSLRLGNNNITCVGAEQLAEGLSHNQSLQYLGLWGN
KIGDRGAEALATALKNSKSLIWLSLVDNGVGSAGACALAKLVSQSKTLAELWLSKNCISR
NGVECLIEALKINCSVKEVWLRRNNLSPEEEEELSKQESRLTF
NT seq
3012 nt
NT seq
+upstream
nt +downstream
nt
atgtctcatccctttagtttggttctgattgtgtctgttgactttgagacaaggcagagt
tccactatgagcactcagttgatcctaaaacagcgagcagagcttctggcagtcctatgt
ggtggaggcagtgctgaacctctggactgtgttctggacttacttctggcgtgggaggtt
cttgtctgggaggattacctaaacatacgggtggtggagaaacccttatgttctaatgta
aggcaacttttagatgtggtgtatgataaaggagaagatgcatgcagcttttttttggct
gcaattaaccagatcttaccagatgagcagaaggtgggactgtgttttgggaacggatgt
gctgtggtgggcaagaacagaccagactctgcaactttaacattattggctgacaggcca
gtcttagtgacaaagctcagagataatattgacgaagctttgcatgctttactgacaact
ggctgcttcaccatcaaagattgtgatggggtgcaactacctgtatacacaccgtcacaa
caggttcggaggctgttagaccaagtaaagtttaaaggggaaactgctgcaaagacctta
ctacagtttctagaacaaacagagccaaccagaccaaaccctgaagagaaagaaagtcac
ctttctgctgattgtctgctgtaccagacgaagctgcgaagctctgttgctgcacagtca
ctctttctcagcacctacggtgggacaggacgtttctccttggatgatatttacactgat
ggacttcttgaagtaatggatggttctggtgaaactactacattagggctggaggatgtg
gtgggtcccatagggagtctaaatgaagatgctgacaccattcttgtgtctggggaggca
ggaagtggcaaaagcacactgcttcagcgactgcacttgctctgggcaagaaaagctttg
ctcacaaacacttttctgctgttctccttcagttgccgcaaactgaattcagagcacaga
gagttatctctgaaagagctcctcttcctgcactgctgctggcctgatcgaagtcaggat
gaggttttccagtacatcctagaccaccctcatatggtgctgttcacttttgatgggctt
gatgaatttaaacacggtttcacagatgaggaacgtcactgctgccccacaaagcaagtg
cctatacatgtattgcttttcaatctgttgcagggtacgctaatgaagggcattttgaag
gtggtcaccagcaggccacaggctgtaggcccatcgctgaagcgctatctccgcaaagaa
gtgcacctgaagggtttttcttgtagaggtatcaactgctttgtgaagaaacatcatagc
gaccctgctatagctagaagtgtcatcgagtccctccagagtaacacggtgttgctaggt
ctttgccacatcccagtcttttgctggattgtgaccaagtgccaccgggagcttctgggt
ggtcaggatggtattcctcagaccatcactgatgtctacctcctggtcttacagcatttc
ttcaagcgaaactcatctcagccccaaggagtcctgggaaaggcctggttggaggaacat
ttgaacacagtgttaaaacttggacagttggcattggaaggcctggaagcctcttgttat
gtgttctcaggatatgagctgcaaagaaatgggctcacagaacaggatatcagcatgggt
ttcctaatttactgcaatgacctatccgtgacacattgcaaacactacgagtttctgcac
atcaccttgcaatgcttcttcgctgctctgtatgttgttcttactcgtaacaacaatcgc
tctgctatctccagactctttcagcctcagtacacgcagtggtcaggcctgtctcaaagg
tgtcttggacactgtattgatccgtcagttgaggaggtgaagacccatgtggcagagaca
ccaaacctccagattacagctcagtttgtgtcaggacttttttctcagcggcaccataat
ctcctcctggactgctgtcctactgctgtgcgggaacgcaagttcaagcaggtagtgaag
tcattgtctaaaggaatgcagagacatttcaagacaattcctcgtcctgtagaaggggaa
aagaagagcatgcatgccatgccaagttttgtttggctaatcaagtgcatatatgaaatg
caagacaacagtatcgctcaaggtgccgtggctaagttggacgttgaacacctgaagcta
acctattgcaacattggaccgatggaatgtactgcactgacgtacgtgctgaagttcctg
cggaatcctgttgggcttcagttggacaacaattcagttggagatgtgggcgtggagcag
cttctaccttgtctacatatttgtcactccctttatttaaggaacaacaacatatcagat
gaaggaatccggaaacttctggaaaagggaatgaagtgtgaaagcttccaaaaaatagcg
cttttcaacaacaagctcacagatgcttgcaccaaacactttgcttggctgctaaaagaa
aagcagaacttcctgtctttgaggcttgggaataataacatcacatgtgttggagcagag
cagcttgcagaaggcctaagccacaaccagtctttgcagtatctgggattatggggtaat
aaaattggggacaggggagctgaggcattggcaactgcgctgaagaatagcaaatcacta
atatggttaagtctggtggataatggtgtgggcagtgcaggtgcatgtgctctggctaaa
ctcgtcagtcagagcaaaactctggcggaactgtggctgagcaaaaactgcatcagcagg
aatggagttgagtgtctaatagaggcactgaaaattaactgtagtgttaaggaagtgtgg
ctgagacgaaataatctgagcccagaggaagaagaggagctgagcaagcaagaaagcaga
ttgaccttctga
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integrated database retrieval system
