Pimephales promelas (fathead minnow): 120468972
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Entry
120468972 CDS
T08155
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase radical fringe
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm00514
Other types of O-glycan biosynthesis
pprm04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
120468972
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
120468972
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pprm01003
]
120468972
Enzymes [BR:
pprm01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
120468972
Glycosyltransferases [BR:
pprm01003
]
Glycan extension
O-Glycan
120468972
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fringe
Motif
Other DBs
NCBI-GeneID:
120468972
NCBI-ProteinID:
XP_039513568
LinkDB
All DBs
Position
Unknown
AA seq
197 aa
AA seq
DB search
MCFLSSPCVFCRWFCHVDDDNYVILPSLLDLLSSYSHTQDVYLGRPSLDHPIEAAERVKS
DGSVSVKFWFATGGAGFCISRGLALKMSPWASLGNFITTAEKIRLPDDCTVGYIIEALLE
VPLTHTGLFHSHLENLQRLPTDSILKQVTLSYGGFENRRNVVSVGGVFSLAEDPSRFKSV
HCLLYPDTEWCPRKTRH
NT seq
594 nt
NT seq
+upstream
nt +downstream
nt
atgtgctttctgtcttccccgtgtgtgttctgcaggtggttctgtcacgtagatgatgat
aactatgtgatcctgcccagtttgctggatctgctgtcatcctactctcacacacaagat
gtgtatctgggccgacccagtctggaccaccccatagaggccgccgagagggtcaagagc
gacggatcggtgtccgtgaagttctggtttgccactggaggagcgggattctgcatcagc
cgaggcttagcgctcaaaatgagtccatgggcaagtcttggaaacttcatcacaaccgca
gagaagatccgcctcccggacgactgtacagtaggttacatcatcgaggcgttgctggaa
gttcctctgacacacacaggcctgttccactcacacctggagaacctccagagactccct
acagacagcatactcaaacaggtgaccctcagttatggtggattcgagaacaggaggaat
gtggtcagtgttgggggagtgttctcattggctgaagacccttcacggtttaaaagcgtt
cactgcctgctctacccagacaccgagtggtgtccacgcaagactcgtcactga
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