Pimephales promelas (fathead minnow): 120469966
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Entry
120469966 CDS
T08155
Symbol
ext1c
Name
(RefSeq) exostosin-1c
KO
K02366
glucuronyl/N-acetylglucosaminyl transferase EXT1 [EC:
2.4.1.224
2.4.1.225
]
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
pprm01100
Metabolic pathways
Module
pprm_M00059
Glycosaminoglycan biosynthesis, heparan sulfate backbone
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
120469966 (ext1c)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pprm01003
]
120469966 (ext1c)
Enzymes [BR:
pprm01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.224 glucuronosyl-N-acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase
120469966 (ext1c)
2.4.1.225 N-acetylglucosaminyl-proteoglycan 4-beta-glucuronosyltransferase
120469966 (ext1c)
Glycosyltransferases [BR:
pprm01003
]
Glycan extension
O-Glycan
120469966 (ext1c)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_transf_64
Exostosin_GT47
RXYLT1_C
Motif
Other DBs
NCBI-GeneID:
120469966
NCBI-ProteinID:
XP_039515278
LinkDB
All DBs
Position
Unknown
AA seq
734 aa
AA seq
DB search
MQARKKYVLLGLCSFCWLLLYYLQDRLLGFLVYRRGEGARPWPDWLDRDLFPGFAEHAEL
LNDGGPGDSPRQRRQAWTGIYKDSRCRMETCFDFARCQALSTFRVYIYPPEKSERVSESY
RKILTSVAESRYYTSDPREACLFVLGIDTLDRDQLSTQFVPNVDERIRGYPLWNDGRNHV
IFNLYSGTWPNYTEDLGFNMGQAILAKASLNTEHFRPGFDVSIPLFSKEHPQKGGERGWL
VRNTVPPRRKYLLMFKGKRYLTGIGSDTRNALHHIHNGKDIVSLTTCRHGKDWEKHKDAR
CDRDNQEYERFDYQELLHNSTFCLVPRGRRLGSFRFLESLQAACIPVLLSNGWELPFSDV
IQWNQAVVEGDERLLLQVPSTVRAVSPDRVLALRQRTQMLWDAYFSSVDKIVLTTLEIIK
DRVYSHISRNKFMWNALPGGLLVLPEYSTHLAHYPFYYYNLGISPGQEFTAVIHATSPLV
SQSQPIMKLLQVVSKSKYCSQIIILWNSEKSLPQRSKWPPMPVPLIVTDGRRKTSSRFLP
HAAIETEAVLSLDEDTVLLTSEINFAFHVWRSFPERIVGYPPRSHFWDPVKKAWGYTSKW
TNEYSIVLTGAAFYHRYYHHLFSHYLPSSLRALVDRTANCEDILMNFLVSSVTHMPPIKV
AQRKQYKEMPTLQGTKMAPWANPEHFTQRQECVNTFASWFGYMPLMHSQFRLDPVLFKDH
VSVLRKRYKDLERV
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcccggaagaagtacgtgcttctgggcttgtgctcgttctgctggcttctgctg
tattacctacaggaccggctcctaggtttcctcgtgtataggagaggagagggtgcgcgg
ccgtggcccgactggctagatcgggatcttttcccgggattcgccgaacacgccgagctg
ttaaatgacggaggaccgggagactcgcctcggcagcgacgccaagcgtggacggggatc
tacaaggacagtcggtgcaggatggaaacatgcttcgattttgcgcgatgtcaagctcta
agcacgtttcgggtctatatttatccgccggagaagagcgaacgagtgtcggaaagctat
cggaaaatcctcacctcggtggcagagtcgcgttactacacgtcggatcctcgggaagcg
tgtctattcgtgttgggaattgatacgcttgaccgggatcagctatcgacgcaatttgtt
cctaacgtagatgagcggattcgcggatacccgctctggaacgacgggagaaatcacgtc
atctttaacctttattctggaacttggccaaattacacagaggatctgggatttaacatg
ggacaggctatcttagcaaaagcaagcttgaatacggagcatttccgaccgggatttgac
gtgtcaatcccgttgttttctaaagaacaccctcagaagggcggggagcgcggatggcta
gtgcgcaacactgtcccaccgcgccgaaagtacttgttaatgtttaaagggaaacgttac
ttgacgggcatcggatcggacactcgtaacgctctgcatcacatccacaatgggaaggac
attgtgtccctcaccacgtgtcgccacggaaaggactgggaaaagcacaaggatgcgcgg
tgcgaccgggataaccaggagtatgagagatttgactatcaagagctgctccacaactcc
accttctgtctggttccccgcgggcgacgcttgggctcgttccggttcctcgagtctctg
caggccgcttgtatcccagtgttactcagtaacggatgggaattaccgttctctgatgtc
atccagtggaaccaggccgtcgtcgagggcgacgagagactgttgctacaggttccgtcc
acggtgcgggcggtgtcccctgaccgggttctggccctcagacagcgcacacagatgctc
tgggacgcatacttctcctccgtggataagattgtcctcaccacactggagatcataaag
gatcgagtttactcgcacatctccagaaataagttcatgtggaacgccttacctggaggg
ctgctggttctgcccgaatactccacacacctggcgcactaccccttctattactacaac
ctggggatcagcccgggtcaggagttcactgcggtcattcatgccacctcacctctggtg
tcacagtctcagccaatcatgaagctccttcaggtcgtctccaaatccaaatattgctca
cagatcatcatcctgtggaacagtgagaagtcgctccctcagcgcagtaaatggccgccg
atgcccgtgccgcttatcgtcacagatggcaggaggaaaacgagcagccgattccttcca
catgctgctattgagacagaggcggtcttgagtctggatgaagacacggtgctgttgacc
agcgagatcaattttgctttccatgtgtggcggagttttcccgagaggattgtcggctac
cctcccaggagccatttctgggaccctgtaaagaaagcctggggctacacctctaaatgg
accaacgagtactccatcgtcctcaccggagccgcgttttatcacaggtactaccatcac
ctgttctcccactatctgccctcctccctgcgtgcgctggtggatcgcaccgctaactgt
gaggatatcctgatgaacttcctggtctcctctgtgacacacatgccaccgattaaagtg
gcacagagaaagcagtacaaagagatgccgaccctgcagggcactaagatggcgccgtgg
gcgaacccagagcacttcacccagaggcaggagtgtgtcaacaccttcgcaagctggttt
ggttacatgcctctaatgcactctcagtttcgcctggaccctgtgctctttaaggaccat
gtgtctgtcctgcgcaagaggtacaaagacctggagcgcgtatga
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