Pimephales promelas (fathead minnow): 120470402
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Entry
120470402 CDS
T08155
Name
(RefSeq) transient receptor potential cation channel subfamily M member 4-like
KO
K04979
transient receptor potential cation channel subfamily M member 4
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pprm04040
]
120470402
Ion channels [BR:
pprm04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
120470402
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSDAT_euk
LSDAT_prok
Ion_trans
Motif
Other DBs
NCBI-GeneID:
120470402
NCBI-ProteinID:
XP_039515888
LinkDB
All DBs
Position
Unknown
AA seq
1226 aa
AA seq
DB search
MNEKDIEQGGVAVMPKTDLSWIPGFFKKRVCTTFVEDSFSNGGLCQCGSTRDTHPSVALG
DNFSTAMVSHWESTQHSSEQPTDAYGELEFAGAGKRHSYFLRLSSTTDSSSVFNIMREHW
KLPQPNLVVSVVGGEKKSEVKTWVRDVLRQGLVKAAQSTGAWIISGGLMEGLGRCVGKAV
KDHATATSSVTLSKVVLIGIAPWGLVKNREQLVNPEGSFPAKYLVKNGARDSCYLDNNYK
AFLLVDDGTIGRKGGEVAFRARLEDYISRQRTGSASIDIPVLNMLISGEASMLEALDISL
KNSMPWLVLAGSGGLANLVCDIVENVQSAPMPSTGGAEKEEGTPSMELRERLAEKVKIYF
PSEQEMDKHVDRVFSIYQNKDLICIYNVEQEGADDFDTVMLKVLVQASKKHATGNSNPYT
DELKLAVTWNRVDIAKSELFNGNIDWKYDDLKDSMNDALMNDKPQFVRLFIDHGLNILSY
LTYEKLEELYNSIPDNSQAGKLLRHILKERRNESSNDKKCSISIYEVSQLLELLLGEVCH
PFYKSVLMVNSNSTKRKAFKKACQVLQGECSYRKLQCEHAWLCLFIWAVLQNRSEMAIFC
WEMCGESVLTALGGCKLLRELSKQEIETEAKLSMKELAQKFENMAHDVFSMCYQTKASDS
FKLLIRKSKMWGDATCLKMAMAADARVFFSHDGVQSLLSQIWWGQMERGTELWKLALATI
IPPLVYTNLIKYRKEGHTEDKSVMVPPPSATDCHYTETVFSFNDIKHHEAEQEDHIRRPT
KGIFAHGKSKEPFLFSRWRQYWYAPVTSFIGNVLMYFLFLFLYAYVLLVDFKPPPPDGPA
PSELVLYFWVFTIVCEEIREAFIVGSKTFTQSLMLYAQDVWNKCDILAISLFMAGLCCRM
FKSSYSMGRGILCIDYMVFTLRLIHIFAVHRQLGPKIIILVKMIKDAFFFLFFLAVWLSA
YGVANQALLYTYDPNPTRAFRRVLYRPYLHIFGQIPVEEIDTGKYWDRDCTDNLTLINEG
KEPCRDTSHNWLVVILLVIFLLVTNILLINLLIATFSYTFSKVQERSDAYWKFQRYNLIV
EYHSRPNLAPPFIILSHINLFIKRNIRKVPSTKIQHFALDLKGREANKLVKWETLQKENY
LAFESKKQKGTDSERLKRMSAKVDGVLKQVCEIKDVDRRLRTLESEMEFCASSLQWMMEA
MSQSSTAKGTKAHPTRKAVVSASLDK
NT seq
3681 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaaaaggacattgaacaaggcggagttgccgtgatgccgaaaacagatctgagc
tggattccaggtttctttaaaaagagagtgtgcacaacatttgtggaggactctttcagc
aatggtggtctgtgtcagtgtgggtccacgcgagacacgcacccctcagtggccctgggc
gataacttcagcacagccatggtcagtcactgggaaagcacacagcactcctccgaacag
cccacagacgcctatggagagctggagtttgctggggccggcaagagacacagctatttt
ttgcgtctctccagcactactgattcttccagtgtcttcaatatcatgagggagcattgg
aaactgccgcagcccaacctggtggtgtcagtggttggtggtgagaaaaagtcagaggtc
aagacctgggtgcgagacgtgctgaggcaggggctggtaaaagctgcacagagtacaggt
gcgtggatcatatccggaggtttgatggaaggcctcggcaggtgtgtaggaaaagctgtg
aaagatcatgccactgcaacgtcttctgtcactctcagtaaagtggtacttataggcatc
gctccctggggcctggtgaagaatcgggaacagctcgtcaaccctgagggaagtttcccc
gcaaagtatttagtcaaaaacggagcacgggactcttgctatctggataataattacaag
gctttccttctggtggatgatgggaccatagggcgtaaaggtggtgaggttgccttcaga
gcccgtctggaggattacatttcacgtcagcgcacaggcagtgcaagtatcgacattcct
gttctgaatatgctgatatctggagaagcttccatgctggaggcattagatatctctctg
aagaattcaatgccctggttggtcctggctggttcaggggggcttgccaatcttgtgtgt
gacatcgtggagaacgtgcaatctgctccgatgccctcaactggaggagcagagaaggag
gaagggactcccagcatggagcttagagaacgattggcggagaaagtaaagatatacttt
ccttcagagcaggagatggacaaacatgttgatagggttttcagcatctaccaaaacaaa
gacctcatctgcatttataacgtggaacaggaaggagcggatgattttgacactgtgatg
cttaaagtccttgttcaagcgagtaaaaaacatgctacgggcaattctaatccctatact
gatgagttgaaacttgctgtaacatggaacagagtggacattgccaagagtgaactcttc
aatggaaacatcgactggaagtacgatgatctgaaagattccatgaatgacgcgctgatg
aacgataaaccccagtttgttcgtctcttcatcgatcatggtctgaacattttgagctac
ctgacttacgaaaaactggaagaactttacaactccatccctgacaacagccaggccggc
aaactgctgcgtcatatcctgaaggagcgcaggaacgagtccagcaatgataagaaatgc
agcattagcatttatgaggtgtcccaactcctggagcttctgttaggggaggtatgccat
cccttctacaagtctgtactgatggtgaacagtaattcaaccaaaagaaaagcttttaag
aaagcatgccaggtcctgcagggggagtgtagctatcggaagctgcagtgtgagcacgcg
tggttatgtctcttcatctgggcagtgctgcagaaccgcagtgagatggccatcttctgc
tgggaaatgtgcggcgagtcggtactgacggctctgggaggatgtaaactgttgagggag
ctgtctaaacaggagattgagacagaggccaagctttccatgaaggagttggcccagaag
tttgagaatatggctcatgatgtgtttagcatgtgctaccaaaccaaagccagtgattcc
tttaagctactgattcgcaagtctaaaatgtggggtgatgccacctgtctgaagatggcc
atggctgctgatgcccgtgttttcttcagccacgatggagtacagtcgctgctgtctcag
atttggtggggtcagatggagagaggaactgagctctggaaacttgcactggctacgatc
attcctcctctagtctacaccaacctcatcaaatacaggaaagagggtcacacagaagac
aaatcggtgatggtacctccaccctcagcaacagactgtcactacacagaaactgtcttc
tccttcaatgacatcaaacaccatgaagcagagcaagaggatcatatcagacgaccaaca
aaaggtatttttgcacatggcaaatctaaggagccctttctgttttcccgctggaggcag
tactggtacgctcctgtcacttcatttatcggcaacgttctgatgtacttcctgttcctg
tttctgtacgcctacgtgctattggtcgacttcaagccacctccccctgatggtcctgcc
ccttcggaattggtgctgtatttctgggttttcactatcgtgtgtgaggagattcgagag
gcgtttattgtgggcagtaagacttttactcagagtttgatgctgtatgctcaggatgtg
tggaataagtgtgatattcttgccatctccctcttcatggctggtctgtgctgcaggatg
ttcaaatcgtcatacagcatgggacgtggtatactgtgtattgactacatggtcttcaca
ctccgactcattcacattttcgccgttcacagacagctgggtcccaaaatcatcatactt
gtcaaaatgataaaggatgcgttcttcttcttattctttctggcggtgtggctgagtgcg
tatggagtggccaatcaagctctactatatacatacgatccaaaccccaccagagcgttt
cgtcgagtattgtacagaccatatttgcacatatttggacagatccctgtggaagaaata
gacactggcaagtattgggatagggactgcacagataatctcacattgattaatgaaggg
aaagagccatgtagagacaccagccacaactggcttgtggtcattttgctggtcatcttc
ctactggtcaccaacatcctactcatcaacctgcttattgccacattcagctatacattc
tctaaggttcaggagcgcagtgacgcatactggaagtttcagcgctataatctaatagtg
gagtatcattctcgtccaaatctcgctccacccttcatcatcctatcccacatcaacctc
tttatcaaaagaaacatccgcaaagtgccatccaccaaaatccagcattttgctcttgat
ttgaagggtagagaggctaacaagctggtgaaatgggagaccttgcagaaggagaactac
ctggctttcgagagcaaaaaacaaaaagggaccgactctgagaggctgaaacgcatgagt
gctaaggtggacggtgtcctcaaacaggtttgcgagatcaaagatgttgaccgcagactg
cgaacattagaatcagagatggagttctgtgcatcttctcttcagtggatgatggaagct
atgtctcaaagcagtacggcgaagggcactaaagcacacccgacacgcaaagctgttgtt
tcagcctcccttgacaaatga
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