Pimephales promelas (fathead minnow): 120470441 Help Entry 120470441         CDS       T08155                                  Symbol irf3 Name (RefSeq) interferon regulatory factor 3   KO K05411   interferon regulatory factor 3 Organism pprm  Pimephales promelas (fathead minnow) Pathway pprm04620   Toll-like receptor signaling pathway pprm04621   NOD-like receptor signaling pathway pprm04622   RIG-I-like receptor signaling pathway pprm04623   Cytosolic DNA-sensing pathway pprm05168   Herpes simplex virus 1 infection Brite KEGG Orthology (KO) [BR:pprm00001]  09150 Organismal Systems   09151 Immune system    04620 Toll-like receptor signaling pathway     120470441 (irf3)    04621 NOD-like receptor signaling pathway     120470441 (irf3)    04622 RIG-I-like receptor signaling pathway     120470441 (irf3)    04623 Cytosolic DNA-sensing pathway     120470441 (irf3)  09160 Human Diseases   09172 Infectious disease: viral    05168 Herpes simplex virus 1 infection     120470441 (irf3)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03000 Transcription factors [BR:pprm03000]     120470441 (irf3)    04131 Membrane trafficking [BR:pprm04131]     120470441 (irf3) Transcription factors [BR:pprm03000]  Eukaryotic type   Helix-turn-helix    Tryptophan clusters interferon-regulating factors     120470441 (irf3) Membrane trafficking [BR:pprm04131]  Autophagy   Other autophagy associated proteins    TRIM-directed selective autophagy     120470441 (irf3) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  IRF IRF-3 Motif Other DBs NCBI-GeneID:  120470441 NCBI-ProteinID:  XP_039515957 LinkDB All DBs Position Unknown AA seq 449 aa AA seqDB search MTQPKPLFVPWLYQKIESGSYPGVCWTSKELQQFSIPWKHALRQDKNSDDVLIFKAWAQT SASGDRINGDPSIWKRNFRSALRAKGFKMVLDNKNDTADPHKVYQFPSDCLSAGSEGSQE TDFSPELYLDEESVFSKNPSQGLEGQLTGLNLHESPSRVWNSEQLYLGQQLFQTLDPCSE PQFTGMAHFQRVDPPGAFSSAGGAVGGLGQISPTDAATAVNPHSPEYQQPAACPPHAEGN QDAIPEPKLETCFRIKVYYKGKMVLDKLVEDSGFRLMYQENIDESRADLPVVRLPPPPDD IPDQNQIRLTNDILNNLGGLEVRRSDAVVYGHRWGNTRIYWGLCKHEKSPTTRELAKNTP DPIFFFKNYISGLMEFMETSRESPSYTLYFFLGEKWPDPKMKPWEKKLVMIEVILTSLEG LNTLAVSRGASSLQSVELQLSLELMMELC NT seq 1350 nt NT seq  +upstreamnt  +downstreamnt atgacccaaccaaagccgctcttcgttccctggctgtaccaaaaaatagagagtggaagt tatcctggagtgtgttggaccagtaaagaacttcagcagtttagcattccttggaagcat gctttgagacaggacaaaaacagtgatgatgtcctcatattcaaggcatgggctcagacc agcgcttctggagacaggataaatggagatccctctatttggaagaggaacttccgaagc gctcttcgtgccaaaggcttcaagatggtacttgacaacaagaatgacactgcggatccg cataaagtgtatcagtttccgtctgattgtctttctgcaggatcggaagggtctcaagag actgatttttctccagaactatatttggacgaggaaagcgtgttctctaaaaacccatcc caaggtttagagggacaattaactggactaaaccttcatgaaagtccctcccgagtttgg aattcagagcagttatacttgggacaacaactcttccaaacattggatccatgttcagaa ccccagtttactgggatggcccattttcaaagagtggacccccccggagccttctcttca gctgggggtgcggttggtggcttggggcagatttcaccaactgatgcagcgacggcggtg aatcctcattctccagaatatcagcagccggctgcatgtccaccacatgctgaaggaaat caggatgccattcctgaacccaaactggagacatgttttcggattaaggtgtattacaaa gggaagatggtgttagacaagctggtggaggattctggattcagactgatgtatcaggaa aacattgacgagtccagagctgacctaccagtggtgaggctgcctcctcctccagatgat atcccagatcagaaccagatcaggcttacgaacgatatcctgaataatctgggcggtctg gaggtcaggagatcggatgctgtggtttatggccaccgctggggaaacaccaggatctat tggggtttgtgcaaacatgaaaaaagcccaacaaccagagagctcgccaagaacacgcct gaccccatcttcttcttcaaaaattatatttcaggtttgatggagtttatggagacaagc agggaatctccctcttatactctttacttctttctgggagagaagtggccggaccccaaa atgaaaccgtgggagaagaaactcgtcatgatagaggttattctgacttcactggagggt ttgaacacgttggctgtttcacgtggggcgtcttcactgcagtcagtggagctacaactc tctctggagctaatgatggagttgtgttag

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