Pimephales promelas (fathead minnow): 120470516
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Entry
120470516 CDS
T08155
Symbol
clrn1
Name
(RefSeq) clarin-1
KO
K23841
clarin
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pprm03037
]
120470516 (clrn1)
Cilium and associated proteins [BR:
pprm03037
]
Primary cilia and associated proteins
USH complex and associated proteins
120470516 (clrn1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Clarin-2
DUF6535
Motif
Other DBs
NCBI-GeneID:
120470516
NCBI-ProteinID:
XP_039516000
LinkDB
All DBs
Position
Unknown
AA seq
232 aa
AA seq
DB search
MPSRQKKIIFSIGGVLCFGCVLVVAAAMGTQFWVQAAVLCQTGAQIVNASGAELEKFIGS
ATYGLFHGKGMKQCGLGDRRFYFSFFPDLMDVVPASLHVSVIFFCAVLIVFSSVSCGFFF
FNAFGSPYETLHGPQGLYLWNMITCFCGCLVLILFSSEVKLHHLTEIIFNFNEVSFVYKT
QSERYDRSFWLIFLAFLTHGLNILLIRLAGIQFPFQEAKESDVSTGAADLMY
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atgcctagccgtcaaaagaaaatcatattctctatcggaggggtgctctgctttggctgt
gttctggtcgtggcagctgcgatggggactcagttttgggttcaagcggctgttctgtgt
cagacgggcgcacagatcgtgaacgcgtcgggagcagagctggagaaattcatcgggagc
gcgacctacgggcttttccacgggaaggggatgaaacagtgtggtctgggagacagacgc
ttttatttctctttctttcctgacctgatggacgtggttccagccagtctacatgtgagc
gtcatcttcttctgcgcagtgctcatcgtcttctcctctgtgtcctgtgggttcttcttc
ttcaatgcctttggaagcccatatgagacgctgcatggaccccagggcctttacctctgg
aacatgataacctgtttctgtggctgcttggtccttattctgttctcctctgaggtcaag
ctgcatcacctgaccgagatcatcttcaacttcaacgaggtgagcttcgtctacaagacc
caaagcgagaggtacgacagatccttctggctcatcttcctcgccttcctcacgcacggt
ctcaacatcttgctcatccgccttgctgggatccagttcccctttcaggaggccaaagag
tccgacgttagcacgggagctgcggatctcatgtactga
DBGET
integrated database retrieval system
