Pimephales promelas (fathead minnow): 120471116
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Entry
120471116 CDS
T08155
Symbol
runx2a
Name
(RefSeq) RUNX family transcription factor 2a isoform X1
KO
K09278
runt-related transcription factor 2
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pprm03000
]
120471116 (runx2a)
Transcription factors [BR:
pprm03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Runt
120471116 (runx2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Runt
RunxI
TagH_SH3-like
Motif
Other DBs
NCBI-GeneID:
120471116
NCBI-ProteinID:
XP_039516787
LinkDB
All DBs
Position
Unknown
AA seq
453 aa
AA seq
DB search
MRIPVDPNTSRRFSPPSSSLQPVAGKMSDVQQEPNAAVPRLRQHDNRTMVEIIADHPAEL
VRTDSPNFLCSVLPSHWRCNKTLPVAFKVVALGDVPDGTVVTVMAGNDENYSAELRNASA
VMKNQVARFNDLRFVGRSGRGKSFTLTITVFTNPPQVATYHRAIKVTVDGPREPRRHRQK
MEDPPKPPLFSERLSELERLRQTTMRVAVQTQSPRPSLNATPNSFNPQGQTQISDPRQAQ
SSPPWSYEQPYTPYLSQMTSPSIHSTTPLSSTRATGLPTISDVPRRLSGTSDLSPFSADP
RQFERQFPGLSTLTESRFPSPRMHYPTTFTYTPTPVTSGMSLGISTNTHYHTYLPPPYPG
STQNQSGPFQTSSTPYLYYGASSGSYQFSMVPGGDRSPSRMLPPCTSASTGSSLINPNLP
NQADGGEADGSHSSSPTVLNSSGRMDESVWRPY
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgcgcattccggtagacccgaacaccagccgcaggttcagtccaccgtccagcagcctt
cagccggtggcggggaagatgagcgatgtgcagcaggagccgaacgcggcggtgccgaga
ctccgacagcacgacaaccgaaccatggtggaaatcatcgcggaccaccccgccgagctc
gtgcgcacggacagccccaactttctgtgctcagtgctgccgtctcactggaggtgcaac
aaaactctcccggtggcgtttaaggttgttgctctgggagatgttcctgacgggactgtg
gtgacagttatggcagggaatgacgagaactactcggcagagctgcgaaacgcctcagct
gtcatgaagaatcaggtggcgcgtttcaacgacctgagatttgttggcaggagtggaaga
ggaaagagcttcacgctgacaatcacagtattcacgaacccaccgcaagtggcgacttac
catcgagccataaaggtcacagtggacggaccgcgggagccgcgaagacacagacagaaa
atggaagaccccccaaaacctccgctgttctccgagcgcctgagcgagttagagcgttta
cgccagaccaccatgagagttgccgtgcaaacccagagtccccggccgtctctcaacgcc
acgccgaactccttcaatccacaggggcaaactcagatctcagatccgcggcaggcacaa
tcctctccgccctggtcctacgagcagccgtacactccttacctgagccaaatgacatct
ccctccatccactccaccaccccgctgtcctccacccgcgccacgggcctgcccaccatc
agcgatgtgccaagacgcctctcaggtacgtcggatctcagtcccttctcggccgaccct
cggcagttcgaacgtcagtttcccggtctgtccacgctcacagaaagccgcttccccagt
cccagaatgcactatcctacgacgttcacgtacacccccactccggtcacctccggcatg
tctctgggcatctccaccaacacccactaccacacctacctgcctcccccgtaccccggc
tccacccagaaccagagcgggcccttccagaccagcagcacgccctatctctactacggc
gcctcgtccgggtcgtaccagttttccatggtgccggggggagaccgctccccttccagg
atgcttccgccttgcactagcgcgtccaccggcagctccctcatcaacccaaacctgccc
aaccaggcggacgggggcgaagcggacggcagtcacagcagctcgcccaccgtgctcaac
tccagcggcaggatggacgagtccgtttggcgaccctattga
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