Pimephales promelas (fathead minnow): 120473118
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Entry
120473118 CDS
T08155
Symbol
pdgfab
Name
(RefSeq) platelet-derived growth factor alpha polypeptide b isoform X1
KO
K04359
platelet-derived growth factor subunit A
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04010
MAPK signaling pathway
pprm04020
Calcium signaling pathway
pprm04510
Focal adhesion
pprm04540
Gap junction
pprm04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
120473118 (pdgfab)
04020 Calcium signaling pathway
120473118 (pdgfab)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
120473118 (pdgfab)
04540 Gap junction
120473118 (pdgfab)
09142 Cell motility
04810 Regulation of actin cytoskeleton
120473118 (pdgfab)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
pprm04052
]
120473118 (pdgfab)
00536 Glycosaminoglycan binding proteins [BR:
pprm00536
]
120473118 (pdgfab)
Cytokines and neuropeptides [BR:
pprm04052
]
Cytokines
Growth factors (RTK binding)
120473118 (pdgfab)
Glycosaminoglycan binding proteins [BR:
pprm00536
]
Heparan sulfate / Heparin
Growth factors/receptors
120473118 (pdgfab)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDGF_N
PDGF
TraY
LOH1CR12
Motif
Other DBs
NCBI-GeneID:
120473118
NCBI-ProteinID:
XP_039518726
LinkDB
All DBs
Position
Unknown
AA seq
230 aa
AA seq
DB search
MRTLFCCFLLLTSHLLLVSAEKEFAIPQDFIDRLSHSEINSISDLQRLLEVNSPGPGNEV
IEEVKQKHHQKNHHSYKAGSSDLKSLQLSHRRKRSVVEEAVPAMCKTRTVIHEIPRSQVD
PTAANFLIWPPCVEVKRCTGCCNTGNMRCHPSKKHHRTVKVAKVEFSSRKKAKLKEVLVR
LEDHLECVCTSHHHVMEHVEADAGPLTVKKGKKRKHRKHAVAAQINKDIQ
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgagaaccttattctgctgctttctgctcctcacctcgcaccttctgctggtctctgct
gagaaggagtttgcaatccctcaagatttcatcgacagactgtcccacagcgaaatcaac
agcatcagcgacctccagcggctactggaggtaaattccccaggtcctggaaatgaggtg
atcgaggaggtcaaacagaagcaccaccagaagaaccatcactcatataaggccggttcc
tcagatctcaagagtctgcagctgtcccacagacggaagaggagtgtcgtagaggaggcg
gtacccgccatgtgcaagacacggacagtgatccacgagatcccccgcagtcaagtggat
cccaccgctgcaaacttcctaatatggccgccgtgcgtggaggtgaaacgctgtacaggc
tgctgcaacacaggcaacatgcgctgtcacccctccaaaaaacatcaccgcactgtcaag
gtggcgaaggtagagttttcctcgcgtaagaaagcgaaattgaaggaggtgcttgtccgg
ttagaggatcacctggaatgcgtgtgcacgtcacatcatcatgtgatggagcatgtggaa
gcagacgcaggcccactcacagttaaaaaaggtaaaaaacggaaacacagaaagcatgca
gtggcagcacagatcaacaaggatattcaataa
DBGET
integrated database retrieval system
