Pimephales promelas (fathead minnow): 120473205
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Entry
120473205 CDS
T08155
Symbol
pdgfrb
Name
(RefSeq) platelet-derived growth factor receptor beta
KO
K05089
platelet-derived growth factor receptor beta [EC:
2.7.10.1
]
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04010
MAPK signaling pathway
pprm04020
Calcium signaling pathway
pprm04510
Focal adhesion
pprm04540
Gap junction
pprm04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
120473205 (pdgfrb)
04020 Calcium signaling pathway
120473205 (pdgfrb)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
120473205 (pdgfrb)
04540 Gap junction
120473205 (pdgfrb)
09142 Cell motility
04810 Regulation of actin cytoskeleton
120473205 (pdgfrb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pprm01001
]
120473205 (pdgfrb)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
pprm04090
]
120473205 (pdgfrb)
Enzymes [BR:
pprm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
120473205 (pdgfrb)
Protein kinases [BR:
pprm01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
120473205 (pdgfrb)
CD molecules [BR:
pprm04090
]
Proteins
120473205 (pdgfrb)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
Ig_2
ig
V-set
C2-set_2
Adeno_E3_CR1
Ig_6
Ig_VEGFR-1-like_5th
RIFIN
VEGFR-1-like_Ig-like
EcsB
VEGFR1-3_N_Ig-like
Motif
Other DBs
NCBI-GeneID:
120473205
NCBI-ProteinID:
XP_039518853
LinkDB
All DBs
Position
Unknown
AA seq
1066 aa
AA seq
DB search
MKSFTIGRFQLTAMTTGLVLLCLGGSGLELNPSVSEVILSTNSSFTITCSGWRNVSWYYK
REENVPAFHTESRSPTSSVLSLENVTWTHTGVYVCSENGTNETREVAVFVPDPEVWFLNN
DHSMVTKTREESTIPCLVTDPSINVTLYERDTDIVVEGSYNPSVGYTAALDDRNYICRGE
LNGQEKESIPFYVFSIFAPEALDPYINASKTVLKQGETLNVNCTVHGVQLVFFQWDFPNK
DEEDIEPLTDVLSSMSMRSCLNITNASLARSGQYVCHVHEGVGEHTASASIDITVLERGF
VALGSHPDRNISAHLGENVELKVEIEAYPKPIIRWSKEGTVIRGHNTRQEQETRFVSTLT
LVRIRLEQMGLYTVSIQNEDDFKEMTFDLEVKVRPQITELSDHHLPGKKHAVTCVAEGVP
SPSIQWFSCDSMTKCSNRSAVWSPLVEDPERVSIQTNVTYNNTRRIHQAHSQVTFLRPQL
VTIRCEASNERGARARDIRLVNNTLFSQVAVLAAVLALVVIVIISIIILVAVWRKKPRYE
IRWKVIESVSLDGHEYIYVDPIHLPYDLAWEMPRDSLVLGRTLGSGAFGRVVEATAHGLS
RSQTTTKVAVKMLKSTARRSETQALMSELKIMSHLGPHLNIVNLLGACTKQGPLYLVTEY
CRYGDLVDYLHRNKHSFLQSYADKNHMTNGSLICNDSDVPTGKEYVSFGSECDGGYMDMT
KDEQMEYVPMQELADSIKYADIQPSPYESPYQQDIYQEQGHRVDHSLVISDSPVLSYGDL
VGFSFQVAKGMEFLASKNCVHRDLAARNVLICEGKLAKICDFGLARDIMHDNNYISKGST
FLPLKWMAPESIFHNLYTTLSDVWSYGILLWEIFTLGGTPYPDLPMNELFYSALKRGYRM
AKPSYANEDIYEVMRKCWDEKYEKRPEFSFLVHTMGNMLSDGYKKKYSQVSDSFLKSDHP
AVARVKPLVPSPFPGAFSLESPTSDETPNPSPQADGDAPHNEYIIPIPDPKPEEEPQYEP
VLTETPSSSLSSDDETVSMETPSTEPEREELLPEHSGSLEVEESFL
NT seq
3201 nt
NT seq
+upstream
nt +downstream
nt
atgaagagtttcaccatcggccgcttccagctgactgccatgacaacaggtttggttctg
ctctgtctgggaggttcaggtctggaactcaatcccagcgtttcagaggtaattctctcc
accaactcctccttcaccatcacctgctccggctggaggaacgtctcctggtactacaag
cgggaggagaacgttccggcgtttcacaccgagtcgcgaagtcccacctccagtgttctg
agtctggagaatgtgacgtggacacacaccggggtttatgtgtgctctgagaacgggaca
aatgagaccagagaggtggctgtctttgtgcctgatcctgaggtgtggttcctcaacaac
gatcacagcatggtgactaagacgcgagaggaaagcacgatcccctgtctggtgacggac
ccgtcgataaacgtcacgctgtacgagagagacacagacatcgtggtggagggctcgtac
aaccccagcgtgggctacaccgctgccctggacgacagaaactacatatgcagaggagag
ctgaacggccaggagaaagagtccatcccgttctacgtcttcagtatatttgctcccgag
gctctggatccctacatcaacgcctccaaaacggtcctgaaacagggtgagacgctgaac
gtcaactgcaccgttcacggcgtgcaactcgtcttcttccaatgggactttcccaacaaa
gacgaggaggacattgagcccttgactgatgtcctgtcgtccatgagcatgaggtcctgt
ctcaacatcacgaatgcctcgctggcccgatccgggcagtatgtttgtcatgtgcatgag
ggtgtgggggaacacacagcttcagccagtattgacatcaccgttctggaaagaggtttc
gtggctcttggttcacatccggacaggaacatctcggcgcatctgggagaaaacgtggag
ttaaaggttgagatcgaggcgtatcccaaacccataattcgctggtctaaagaaggcact
gtgattcgaggacacaacacgagacaggaacaggagacccggtttgtcagcactttgacc
ctggtcaggatccgactggagcagatgggtctctacactgttagcatccaaaatgaagat
gactttaaagagatgacctttgacctagaggtgaaagttcgtcctcagataactgaactc
tccgaccatcacctgcctggaaagaagcacgcggtcacctgtgtggcggagggggtgccg
tctcccagcattcagtggttcagctgtgacagcatgaccaagtgcagtaacagaagtgct
gtgtggagccccctggtggaggatccggagagggtctccatccagactaacgtcacctac
aacaacacacgcaggatccaccaagcgcacagtcaggtgaccttcctccggccgcagctg
gtcaccatccgctgtgaggccagcaatgagagaggagctcgagccagagacatcagactg
gtcaacaacacgttgttttcccaggtggcagttctggccgctgtcttagcactggtggtc
atcgtcatcatctccatcatcatcctcgtcgctgtgtggaggaagaagccacggtatgaa
atcaggtggaaggtcattgaatcggtcagtttagatggacacgagtacatctacgttgac
cccattcacctgccttatgacctggcctgggagatgccacgggacagtctggttctgggt
cgtacgttgggatctggagcgtttggccgtgttgtcgaggcgacggcgcacgggctcagc
cgttcccaaaccaccactaaagtggcggtgaaaatgctcaaatcgacggcacggagaagc
gagacacaagctctgatgtctgaactcaagatcatgagtcacctgggtcctcacctgaac
atcgtcaacctgctgggcgcctgcaccaaacaaggtccattatatctggtgacagaatac
tgtcgctatggcgatctggtggactacctgcacaggaataagcacagcttcctgcagtcc
tacgccgacaagaaccacatgaccaacggcagcctgatctgcaacgacagcgacgtgcca
accgggaaagaatatgtgtcgttcggcagcgagtgtgacggaggatatatggacatgact
aaagacgagcagatggaatatgttcccatgcaggagctcgcagactctatcaagtatgca
gatatccagccgtcgccgtacgagtccccgtaccagcaggacatctaccaggagcaaggt
cacagggtggatcactctctggtcatcagcgattctccggttctgagctacggtgacctt
gttggttttagtttccaggtggccaaaggcatggagttcctggcctcaaagaattgtgtc
catcgagatctggcagcaagaaatgttttgatctgtgagggcaaactggccaagatctgc
gactttggactggccagagacatcatgcacgacaacaactacatctccaaaggcagcacg
tttcttcctctgaagtggatggcgccggagagcatctttcataacctgtacaccactctg
agtgacgtctggtcttacggcatcttactgtgggagattttcactctgggaggaacccca
tatccagacctgccgatgaacgagttgttttacagcgctctgaagagaggttaccgcatg
gccaaaccctcatacgccaacgaggacatatatgaggtcatgaggaaatgttgggatgag
aagtatgagaagcgtccagagttctcctttctggtgcacacgatggggaacatgctttca
gacggatataaaaagaaatactctcaggtgagcgacagctttctgaagagcgatcaccct
gcggtggctcgtgtgaagccgctggtcccgtctccgttcccgggtgccttctctctcgag
tctcccacctcagatgaaaccccaaacccgagcccgcaggccgacggagacgctccacac
aacgagtacatcatccccatccccgaccccaagccagaggaggagccccagtacgagcct
gtgctgacggaaaccccctcgagctctttaagttctgatgatgagacggtctccatggaa
accccgagtactgaacccgagcgagaggaactgctgccggaacattctggaagtctagaa
gtggaagagagcttcctgtga
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integrated database retrieval system
