Pimephales promelas (fathead minnow): 120476488
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Entry
120476488 CDS
T08155
Symbol
tiam1a
Name
(RefSeq) LOW QUALITY PROTEIN: T-lymphoma invasion and metastasis-inducing protein 1
KO
K05731
T-lymphoma invasion and metastasis-inducing protein 1
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04530
Tight junction
pprm04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
120476488 (tiam1a)
09142 Cell motility
04810 Regulation of actin cytoskeleton
120476488 (tiam1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pprm04990
]
120476488 (tiam1a)
Domain-containing proteins not elsewhere classified [BR:
pprm04990
]
Pleckstrin homology (PH) domain-containing proteins
Dbl-Like RhoGEF family proteins
120476488 (tiam1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH_Tiam1
RhoGEF
Tiam_CC_Ex
PH
RBD
PH_9
SOS1_NGEF_PH
PDZ
PDZ_6
Motif
Other DBs
NCBI-GeneID:
120476488
NCBI-ProteinID:
XP_039523464
LinkDB
All DBs
Position
Unknown
AA seq
1625 aa
AA seq
DB search
MGNVESQNGGHAYYSEGQGHLSRKHMTRSLRISNKQSRRSRHASTSKAEHRNSETSTKSS
STPSIPQSLSENGLEPFNETDALEGYGGTIWVDRMAMNLRPMSFHDNLADPTITPGSEDG
VEMDTVVADGCDDDGLFTGEDTYLQRTRDGPLEGGSFKKKRSKSADMWREDSMEFSLSDL
SQEHLTSTEEIIGTNEDEDKSFANCGGRRRTSSPRTLESHSGDRANSLDELSTLRGSHHL
YNGHNPERTEGAGMNDEILSPAEEEGSGYGAYTLPCRRSHCLSEGLSNHKATICSRMQGR
RAQTTHDITACDGSEYGDSGIDGGAAEVEHSSRRCKAMSASFSVYSTASGSIFAGSDSGS
SSGGGGDRERQAGGDQGVYENFRHELDLNSRQTREFLEEASSAASDERSSGTLSSVYPSD
ILLSTVQGTVRKAGILAVKNFLVHKKNKRVESAAKRKWKQYWVSLKGCTLFFYETDGRSG
IDHNSIHKHAVWVENSIVQAVPEHPKKDFVFCLSNALGDAFLFQTSGQTELENWITAIHS
ACAAVVARQHHHEDTVRLLRSEIKKLEQKIDMDEKMKKMGEMQLSAVTDGKKRKTILEQI
FLWEQNLEQFHMDMFRYRCYLSSLQGGELPNPKRLLAVASRPTKLSMGRLGIFSVSSFHA
LVAARTDGGIRKRTQALSRSSSKRKSRFSSLWGLDTTSKKKTKADPSINQVFVDGEEPVK
RNLEHMFEDAGKETLQKDQEGSVKSLPQHKTDNEVWVPDYLTPSWVSLPDDRPVLAIIQP
GETTMEALESLCRAHKLDLSKHYIRLKFLVDNQLQLYVPKPEEDLCDLLFKEIEICAKTN
KVIQFDRDESCAIGYGFSVAVVEEDGRQQLHITDAKAGGLAFAKGLRAGDEILKLNSKPA
SALELADMQAAFSLPSLTLTVSTLPATDPHQLCQLPPRRSDGAQDLCTDIFSQSQEDILD
EGLGLVLHSPDDTMEDRVNLMAESPADSLEDEVDSAHKSTEQVTAFCRNLHDMNSTEGPV
FCSSSSSTSSSPSSCVPSPITPMPVLFTPRQLSDAYKLRKVISELVDTERTYVKDLNILI
ERYLNPLQKQSFLSQDELDVLFGNLAEMVEFQVEFLKTLEDGTRLVPDLDKLERVDQFKK
VLFSLGGSFLYYADRFKIYSAFCASHTKVPKVLTKAKTDPVFKAFLAERNPRQQHSSTLE
SYLIKPIQRVLKYPLLLRELHSLTDPDSEEHYHLDVAMKAMNKVASHINEMQKIHEEYGA
VFDQLISEQSSEKKEVADLSMGDLLLHDTVVWINPPSSLMKGKRDTELAAFVFKTAVVFV
YKDCSKHKKKIGGSHRASVLEERDPFRFRHMISTDALQVRNLPNSEGSSLCEVVHLRSES
EGRPERTFHICCSSPESKKDFLKTVHSILREKQRRQLMKTESLPPNQQYIPFGGKRLCAL
KGSRPAINRAVSDPSRTLGRRKLIRNRFTIDTGVIFDDGSSQDLSPITPTPTDFPLSSSL
QKLQQPIQDTDRWVEDQFDLQHYENQNDVKETDILSDDDEYCQSVRAPSADPSLEESFEA
LSVEGEEVKDPNGLSEDKSPKSQAPPKLTLLRKQCAVEGVASERDCEVIWVRRDDFKNSC
NSDIF
NT seq
4878 nt
NT seq
+upstream
nt +downstream
nt
atgggaaatgtggagagccaaaatggaggccacgcctactacagtgaggggcagggccac
ctctcacgaaagcacatgacccgatcacttcgcatctccaacaagcagtctcgacgatcg
cgtcatgcctcaaccagcaaggctgaacaccgcaactccgagaccagcacaaaatctagc
agcacaccttccattccacagtccttaagtgaaaatggcctggaacccttcaatgagaca
gatgctttggagggctatgggggcaccatttgggtggaccggatggccatgaacttgcgg
ccgatgtccttccacgacaacttggcggatcccaccatcacgcctggctccgaagatgga
gttgagatggacacagtggtggcagatggttgtgatgatgatggacttttcacaggtgag
gacacatacctgcagaggaccagagacggtcctctggaaggtggcagcttcaagaagaag
cgctccaaatcggcagacatgtggagagaggattccatggagttctccctgtcggatcta
agccaagagcatctgacaagcacagaggagattatagggacaaatgaggatgaggacaaa
agctttgccaactgtggaggacggcgtcgcacctcaagcccacggactctcgagtctcac
tcaggagatagagctaactctttagatgaactttccactcttcgtggctcccaccatctc
tataatggtcacaatcccgagaggacggaaggagccggaatgaacgacgagatcttgtct
cctgcggaggaggaagggagtggatatggagcgtacactcttccttgtcgtcgttctcac
tgcctgtctgaaggactgtccaatcataaggctaccatctgctcacgtatgcagggacgg
cgtgcgcaaacaacacatgatatcacagcttgtgatggcagcgagtatggagacagtggt
attgacggtggtgcagctgaggtcgagcactcctcgcgccgttgcaaggccatgtctgcg
tccttctccgtctactccacggctagcggaagcatcttcgcgggaagtgacagtggcagc
agcagcggaggtggaggagaccgtgaacgtcaagctggtggagatcaaggtgtgtacgag
aacttccgtcacgagctggacttgaactccaggcagacgcgggaatttctcgaggaagcc
agttcggctgcaagcgatgaaaggagcagtggaacgctaagctccgtttacccctcagac
attctgcttagcacggtgcagggcactgtgaggaaggccggcatactggctgtgaagaac
ttcttagtacacaaaaagaataagagggtggagtcagcagcaaaaaggaagtggaagcag
tattgggtgtcactcaaaggatgcactctgtttttctacgaaacggatgggcgttcaggg
attgatcacaacagcattcacaaacatgcagtctgggtggagaacagcattgtccaggct
gtaccagaacatcccaagaaagacttcgtgttctgtctgagcaatgcactgggagacgcc
tttctcttccagacatcaggtcaaacagagcttgaaaactggataaccgccatccactca
gcttgcgctgcggtcgtcgcccggcagcaccaccacgaggacacggtacgattgctgcgt
tctgagatcaagaagcttgaacagaagatcgacatggatgagaaaatgaagaagatgggt
gaaatgcagctctctgctgtaacggatgggaagaagaggaagactatcctggagcagata
ttcctttgggagcagaatttggagcagtttcatatggacatgttccggtatcgctgttac
ctgtccagcctgcagggcggcgagcttccaaatccaaaacgcctacttgctgttgcttcc
cgccccaccaaactgtccatgggtcgtcttggcattttttcagtatcatcatttcatgcc
ctggtggcagcgaggacggatgggggaattcggaaacgtacccaagccctgtctcgttcc
tccagtaaacggaagagccgattctcctctctatggggtctggacactacctcaaaaaag
aaaaccaaggcagaccccagcattaaccaggtgttcgtagacggggaagagccggttaag
aggaatctcgagcacatgtttgaggacgctggaaaggagacactgcagaaggaccaagag
ggttcggtgaaaagcctcccccaacacaagacggacaatgaagtttgggtgcctgactac
ctcacgccatcctgggtctctttacctgacgatcgacctgtgttggctatcatacaaccg
ggggagacaaccatggaggccctggagtcactgtgcagggctcacaaactggatctttcc
aagcactatatacggttgaagttccttgtcgacaatcaattgcaattgtatgtccccaag
cctgaggaggacctctgtgacctgctgttcaaagaaattgaaatttgtgccaagacaaac
aaagtcatccagtttgatagagatgagtcctgtgccataggctatggtttctcagtggcc
gtagtagaggaggatggacgccagcagcttcatatcactgatgcgaaagccggaggtctg
gcattcgccaaaggtctgcgagcaggcgatgagattctgaaactgaacagtaagccggcg
agcgctttggagctggcagacatgcaggctgcgttttctctgccctctctcaccctgact
gtcagcacgctgcccgctaccgatccacaccagctgtgccagctgcctccccgacgatcg
gatggggcgcaggacctctgcactgacatcttttcccagagtcaggaggacatcctagat
gaaggtcttggcctggttctgcacagccctgatgacactatggaggacagggtaaaccta
atggctgagagccccgccgacagcctggaggatgaagtagactcagcacacaagagtacg
gagcaggtgaccgctttctgccgcaaccttcatgacatgaattccaccgagggtcccgtt
ttctgttcctcgtcttcctccacatcttcctccccttcatcatgtgtgcccagccccatc
acacccatgcctgttctcttcaccccccgccagctctccgatgcttataaactccgtaaa
gtcatcagtgagctggtggacactgagaggacctatgttaaggacctgaacattttgata
gaacgctacctgaaccccctgcagaagcaaagcttcctttctcaggatgagctggatgtg
ctttttggaaacttggcggagatggtggaattccaagtggagtttctgaaaactctggaa
gatggaaccagattagttccagatttagacaaactggagagagtggatcagttcaagaaa
gttctgttttctcttggcggatccttcctgtactatgcggaccgttttaaaatctacagt
gcattttgtgccagccacacaaaggtccccaaggtccttaccaaagctaaaacagacccg
gtgttcaaggcgttcctggctgagaggaaccccaggcagcagcattcctccacacttgag
tcctacctgatcaaacccattcagagagtcctaaaatacccactactcctgagggagctt
cactctctcaccgacccagacagcgaggaacactaccacctggatgttgctatgaaagcc
atgaacaaagtggccagtcacataaatgagatgcagaagattcacgaggagtatggagcg
gtttttgaccaactcatcagtgagcagagctctgagaagaaagaggttgctgatctgtca
atgggtgacctcttgctacacgacactgtggtctggatcaacccaccctcttctctcatg
aaggggaagagagacacagagctggctgcgttcgttttcaaaacggcggttgtttttgtg
tataaagactgctccaagcacaagaaaaaaattggtggatctcacagagcgtcagtcctt
gaggagcgagacccgtttcgttttagacacatgatctctacagacgctctccaagttcgc
aacctcccaaattcagagggatcttcattgtgtgaggttgttcacttgaggtcggaatct
gaaggtagacctgagaggaccttccacatctgctgcagctctccagagagtaaaaaagac
ttcctaaagacagttcattccatcctgagggaaaaacaacgacgtcagttaatgaagaca
gagagtttacctccaaatcagcagtatattccctttggagggaaacggctttgtgcacta
aagggttcacgaccggccataaacagagcggtttcagacccatctcgaactctcggccgc
cggaaactgatccgtaatcgtttcaccatagacacaggtgtgatttttgatgacggctca
tcccaggacctgtcacccatcaccccgaccccgacagacttcccgctgtcatcttcactc
cagaaactccagcagcccatccaggacacagaccgctgggtggaggaccagtttgacctg
cagcactacgaaaaccagaatgacgtgaaggagacggacatcctcagcgacgacgacgag
tactgccagtccgtccgggccccttccgctgatccgagcctggaggaatccttcgaggcc
ctttcggtggaaggagaggaagtcaaggatcctaacggactctctgaggacaaatctccc
aaatcccaagcccccccaaagttgaccctcctgagaaagcagtgcgcagtggagggtgtc
gcttccgagagggactgtgaggttatttgggttcgcagggacgattttaaaaacagctgc
aacagtgacatcttctga
DBGET
integrated database retrieval system
