Pimephales promelas (fathead minnow): 120478239
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Entry
120478239 CDS
T08155
Name
(RefSeq) homeobox protein otx5-A-like
KO
K09337
cone-rod homeobox protein
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pprm03000
]
120478239
Transcription factors [BR:
pprm03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
120478239
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TF_Otx
Homeodomain
Motif
Other DBs
NCBI-GeneID:
120478239
NCBI-ProteinID:
XP_039525984
LinkDB
All DBs
Position
Unknown
AA seq
216 aa
AA seq
DB search
TVCFPQVWFKNRRAKCRQQQQQQTSGQTKPRPPKKKSSPAREPSVSEANAGTTYSPPPPP
PPPGTSITPSSTSATVSIWSPASISPLPDPLSVSGTCLQRSGGYPMTYTQAPAYGQGYAT
SSSYFTGLDCSSYLSPMHPQLSATGGALSPITGSMSGALSQSPASLSSQGYSAASLGFGA
VDCLDYKDQTASWKLNFSAADCLDYKDQNSWKFQVL
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
actgtgtgttttccgcaggtgtggtttaagaaccggcgcgccaagtgccgtcagcagcag
cagcagcagaccagcggccagaccaaaccccgacccccgaagaagaagtcctcgcccgcc
cgcgagcccagcgtcagcgaggccaacgccggcaccacctacagccctcctccgcccccg
cctccgcccgggacctccatcaccccgagctccaccagcgccaccgtgtccatctggagc
ccggcgtccatctccccgctgccggacccgctgtcggtgtccgggacgtgccttcagcgc
tccggcgggtaccccatgacctacacacaggccccggcgtacgggcaaggctacgccacc
tcctcgtcctacttcaccgggcttgactgcagctcgtacctgtctcccatgcacccgcag
ctgtcggccaccgggggcgcgctcagccccatcaccggctccatgagcggcgctctcagc
cagtcgcccgcctcgctctcgtcccagggctacagcgccgcgtccctgggcttcggcgcc
gtcgactgcctagactacaaagaccaaacggcgtcctggaaactgaacttcagcgccgcg
gactgtctggactacaaggaccaaaactcctggaagttccaggtcctgtag
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integrated database retrieval system
