Pimephales promelas (fathead minnow): 120478831
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Entry
120478831 CDS
T08155
Symbol
mmp13b
Name
(RefSeq) collagenase 3
KO
K07994
matrix metalloproteinase-13 (collagenase 3) [EC:3.4.24.-]
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pprm01002
]
120478831 (mmp13b)
Peptidases and inhibitors [BR:
pprm01002
]
Metallo peptidases
Family M10
120478831 (mmp13b)
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Paralog
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Motif
Pfam:
Peptidase_M10
Hemopexin
PG_binding_1
DUF4953
Reprolysin_4
Reprolysin_3
Peptidase_M66
Reprolysin_5
Motif
Other DBs
NCBI-GeneID:
120478831
NCBI-ProteinID:
XP_039526920
LinkDB
All DBs
Position
Unknown
AA seq
462 aa
AA seq
DB search
MELTAVVLLVIAAHALAKPISSEEKDEVLFAEKYLRRYYGMPAGLQGKEKTSDVMYKKKI
QEMQEFFKLNVTGKLDDDTLELMEMARCGVPDVAEYNHFPNDLKWKTTEVTFRILNYTPD
LSKADVDRAVRNGLNVWSSVTPLKFKKLYEGNADIMISFGAREHGDFNPFDGPEGLLAHA
YPPGNGIGGDTHFDEDETWTKDFNAFNLFLVAAHEFGHALGMAHSSDPGSLMYPVYSYRK
GYPLSEDDIKGIQSLYGENPNHRRIKPKPDAPSKCDPELSFDAVTELRGETIIFKDRFYW
RLHLQMPEPEQTLIKSTWPEIPNKVDAAYENPEKDVVIIFSGIKMWALNGYNLVDGYPKY
IHKLGLPKTVRKIDAAVNIRDTGKTLLFVEEEYWSYDERTGTMDSEYPRSIKEDFPGIGD
EVDAAAYHFGYLYFYHEHIQFEYSYNSRKVMRIMRANSILNC
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggagctcacagctgtggtattgctggtgattgctgcacacgctttagcaaaaccaatt
tcaagtgaggagaaagacgaggtgttattcgctgagaaatatcttcgaaggtactatggc
atgccagctggtctacaaggaaaagaaaaaacatccgatgtgatgtataagaagaaaatt
caagagatgcaagagttttttaagttgaacgttacgggaaagctggacgacgacactttg
gagctaatggaaatggctcgctgcggagttcctgatgtggccgaatataatcactttcca
aatgacctcaagtggaaaaccacagaggtgaccttcaggattctgaattacactcctgac
ctgagcaaggcggatgtggacagagccgtccgaaatggtttaaatgtctggagcagtgtg
actccgctgaagtttaagaaactgtatgagggaaatgctgacatcatgatcagcttcgga
gcaagagaacatggagacttcaacccgtttgatggaccagaggggcttcttgctcatgct
tacccccctggaaatggcattggtggtgatacacactttgatgaggacgaaacgtggacc
aaagactttaatgcattcaatctcttcttggttgcggcccatgagtttggtcatgctctc
ggcatggcccattcctctgaccctgggtcactgatgtacccggtttactcctaccgcaag
ggttacccgctctctgaggatgacattaaggggatccagtctctctatggtgaaaaccca
aaccatagaaggatcaagcccaaacccgacgctccaagcaagtgtgaccctgaactgagt
tttgatgccgtcactgaactccgtggagagacaatcattttcaaagacaggttttactgg
cggctacatttacaaatgcctgagcctgaacaaaccctcattaaaagtacctggcctgaa
ataccaaacaaagtagatgctgcctatgagaacccagaaaaagatgttgtcatcatattc
agtggaatcaaaatgtgggctctcaatggttacaatcttgttgacggctatccaaaatac
attcacaaactgggtctcccgaagaccgttcgcaaaatagatgcagctgtaaacatccga
gatactggcaagactctactttttgtagaagaggaatactggagttatgatgagcggaca
ggcaccatggatagtgaatacccacgatccattaaggaggactttcccggaattggagat
gaagtggatgccgctgcttatcattttggatatttgtacttctaccatgagcatattcag
tttgaatacagttacaactcaaggaaagtcatgcgtatcatgagggccaactctattctc
aactgttga
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