Pimephales promelas (fathead minnow): 120478866
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Entry
120478866 CDS
T08155
Symbol
bcl11ba
Name
(RefSeq) BAF chromatin remodeling complex subunit BCL11B a isoform X1
KO
K22046
B-cell lymphoma/leukemia 11B
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pprm03000
]
120478866 (bcl11ba)
Transcription factors [BR:
pprm03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
120478866 (bcl11ba)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-H2C2_2
zf-C2H2_16
zf-C2H2_15
zf-H2C2_5
Actin_micro
DUF3268
Zn_SUZ12
Motif
Other DBs
NCBI-GeneID:
120478866
NCBI-ProteinID:
XP_039526975
LinkDB
All DBs
Position
Unknown
AA seq
812 aa
AA seq
DB search
MSRRKQGNPQHLSQREIITPEAEHVDAGLAVADLHSHPLLDPSMPGTLPPGLGDHDLLTC
GQCQLTFPLGDILLFIEHKKKQCQGLTSGHGCHDKMADRNSPSPPRAELRKVVEPVEIGI
QVTPEEEDERLLTPPKGICPKLESGLAGRDEPSSYICTTCKQPFTNAWFLLQHAQNTHGI
RIYLETNSSNTSLTPRITIPPPIGAESIPQSPLTNFLGDNNPFHLLRMAGPLLREPPPGF
VENRLPNTPPFVSPPPRHHLDPHRLERLSAEEMGLISQHPSAFERVMRMTPMAMESQSMD
FSRRLRELAGNNNSTPPLSPSRANPMHRLLNPNPFQPSPKSPFLSTPPLPPMPPNSTTPP
QTQGKSKSCEFCGKTFKFQSNLVVHRRSHTGEKPYKCQLCDHACSQASKLKRHMKTHMHK
SGSMTGRSDDGLSTTSSPEPGTSDVTGENMKNRDGDFRGEGMGPDNEEEEEEEEEEELEN
ESRPESNFSMDSEFCRNRENGTKPPSDEKNLSLGKMVENVGLSSIQHYNNLIVNNRKRFP
FTKRVSEGQRDVGDDDSVVGEIDQVERATVNGRNCGSGDSFSGLFPRKPTPITSPSLSNS
SNKRIKIEKDLDIPPAPLIPSENVYSQWLVGYAASHHFIKDPFLGFTDSRQSPFATSSEH
SSENGSLRFSTPPGDLLDGGLSGRSGTASGGSTPHLGGGAGPGRPSSKESRRSDTCEYCG
KVFKNCSNLTVHRRSHTGERPYKCELCNYACAQSSKLTRHMKTHGQLGKEVYRCDICQMP
FSVYSTLEKHMKKWHGEHLMTNEVKIEQAERS
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgtcgcaagcagggaaaccctcagcatttgtcgcaaagagaaattataacaccg
gaagctgagcatgtggatgcgggactggccgtggctgatctccactctcacccgctgctg
gatccaagcatgcctgggactctgcctccgggcttgggcgaccacgacctcctcacctgt
ggccagtgccaactaaccttcccactgggggacattctgctcttcatcgagcacaagaaa
aagcaatgccagggtctaacgtctggccacggctgccacgacaagatggcagaccgcaat
agcccctcgccgccccgcgccgagctgagaaaagtggtggaaccggtcgaaattggaatc
caggtgacacctgaagaggaggacgagagactgttgacgcccccaaaaggaatttgcccc
aagctagaaagtggcctggcaggtagagatgaaccttcgagttacatatgcacgacgtgc
aaacagccctttaccaacgcctggttccttctgcagcacgctcagaacacgcatgggatc
cgcatctacttggagaccaactcctcgaatacctccctgactccacggatcactattcct
ccccccattggtgctgaatccatcccacagtccccattaaccaactttttgggggacaac
aaccccttccatctcctacggatggctgggccactactccgagagcccccaccaggattt
gtggaaaaccgcctccccaatacgcctccctttgtcagcccccctccacgacatcactta
gatccccatcgcctggaacgccttagtgcagaggaaatgggtttaatctcccagcatccc
agtgcctttgagagagtgatgcgcatgacacccatggccatggagtcccagtccatggat
ttctcccggcgacttagagagcttgctggaaacaacaactccactccaccgctgtcacca
agccgtgctaaccctatgcatcgcctccttaatcccaaccccttccagccgagtccgaag
tcgccctttctgagcacccctccgctgcctcccatgcccccgaacagcaccaccccacca
caaacacagggaaagtcaaaatcctgcgagttctgcggcaagaccttcaagtttcagagt
aatctggttgttcatcggcgaagccacacgggcgagaaaccctacaagtgccaattgtgt
gaccatgcctgttctcaggctagcaaactgaaacgccacatgaagacccacatgcacaag
tctggctccatgacagggcgctctgacgatggcctgtccaccaccagctcacccgagcca
ggcactagtgacgtaactggggagaatatgaagaacagggatggtgatttcagaggtgag
ggcatgggccctgacaacgaagaggaggaggaagaggaagaagaggaggagttggaaaat
gagagcaggcctgagtcaaacttcagtatggactctgagttctgtcggaatagggagaat
ggcacaaagccaccttcggatgagaagaacctctccttggggaagatggtggaaaacgta
gggctcagctccatccagcattacaataacttaatagtcaacaatcggaaaaggtttccg
ttcaccaaaagggtctcagaggggcagagggatgtgggcgacgatgattcagtagtgggg
gaaatagaccaagtggagcgggcaactgtaaacggaaggaactgtggctcgggcgactct
ttctcaggcctgtttccccgcaagcccactcccatcaccagtcctagcctttccaactcc
tctaacaagaggatcaaaatcgaaaaggatttggacatacccccagcccccctaatccca
tctgaaaacgtctactcccagtggcttgtgggctatgcagcatcccaccacttcatcaaa
gatccctttcttggcttcaccgattccagacaatctccattcgccacctcctcggagcac
tcctctgagaacggcagcttgcgattctccacgccgccaggggacctgctggacgggggc
ctctccggccgcagtggtaccgctagcggaggcagcaccccacacttgggtgggggcgcg
ggaccgggccggcccagctcgaaagagagccgaaggagtgacacctgtgagtactgtggg
aaggtgttcaagaactgtagcaatctgacagtgcacagacgcagccacacaggcgagagg
ccctacaagtgtgagctttgcaactacgcctgtgcccagagcagcaagctcacccgccac
atgaagacacacggccagctcggtaaggaagtgtaccgctgtgacatttgccaaatgccc
ttcagcgtctacagcacgctcgagaaacacatgaaaaagtggcatggggaacatttgatg
acaaatgaggtcaaaattgaacaagcagagagaagctaa
DBGET
integrated database retrieval system
