Pimephales promelas (fathead minnow): 120479480
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Entry
120479480 CDS
T08155
Name
(RefSeq) H-2 class II histocompatibility antigen, A-Q alpha chain-like
KO
K06752
MHC class II antigen
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04145
Phagosome
pprm04514
Cell adhesion molecules
pprm04672
Intestinal immune network for IgA production
pprm05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
120479480
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
120479480
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
120479480
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
120479480
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pprm04147
]
120479480
Exosome [BR:
pprm04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120479480
Exosomal proteins of epithelial cells
120479480
Exosomal proteins of breast milk
120479480
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
C1-set
MHC_II_alpha
Ig_3
Ig_2
C2-set_2
ig
I-set
C2-set_3
Motif
Other DBs
NCBI-GeneID:
120479480
NCBI-ProteinID:
XP_039527921
LinkDB
All DBs
Position
Unknown
AA seq
248 aa
AA seq
DB search
MCLMTVQLSSIKMEVYIIILTLTIVLSSSAEFEHEALEYVACSDVEQEYYIGYDEEEVGH
VDFKQKRGVMTLPDFMGSTTYPGFYEIGADAIQRCKRELPNFDIAFKSLPLEMDAPQTSL
YPKDDVQLGVQNTIICHVTGFYPPSVNISWTKNNVNVSEGMSLSQYRQRMDDTFNIFSTL
KFTPAEGDFYSCTVNHRALQGQPQTKTWDVDVALPSVGPAVLCGVGLTLGLLGVAVGTFF
FIKGHITD
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgtgtctgatgaccgttcaactctcatcgatcaagatggaggtgtatataatcattctc
accctaaccattgtactttcatctagtgctgaatttgaacatgaagctttggaatatgtt
gcatgctctgatgtggaacaggagtattacattggatatgatgaagaggaggtggggcat
gtcgactttaaacagaagagaggagtaatgacattacctgattttatgggatccacaaca
tatcccggattttatgaaatcggtgctgatgcaatacagagatgcaaacgagaattacca
aattttgatattgctttcaagagcctaccattagaaatggatgcaccccagacttcatta
tatccaaaggatgatgtgcagctgggtgttcaaaacaccatcatttgtcatgtgactggc
ttctatcctccatctgtgaacatctcatggactaagaataatgttaatgtatcagagggc
atgagtttaagtcaataccgccaaagaatggatgataccttcaacatattttctactctt
aagtttacacctgctgaaggagacttttacagctgcacggtgaaccacagagccctccaa
ggtcaaccacagaccaaaacatgggatgttgatgttgccctcccaagtgttggtccagca
gtgttatgtggagtgggtctgactcttggactgttgggagtagctgtgggaacattcttc
ttcattaaaggacacataactgactag
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integrated database retrieval system
