KEGG   Pimephales promelas (fathead minnow): 120479482
Entry
120479482         CDS       T08155                                 
Name
(RefSeq) rano class II histocompatibility antigen, A beta chain-like
  KO
K06752  MHC class II antigen
Organism
pprm  Pimephales promelas (fathead minnow)
Pathway
pprm04145  Phagosome
pprm04514  Cell adhesion molecules
pprm04672  Intestinal immune network for IgA production
pprm05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:pprm00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    120479482
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    120479482
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    120479482
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    120479482
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pprm04147]
    120479482
Exosome [BR:pprm04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   120479482
  Exosomal proteins of epithelial cells
   120479482
  Exosomal proteins of breast milk
   120479482
SSDB
Motif
Pfam: C1-set C2-set_2 MHC_II_beta Ig_3 C2-set_3 DUF1687
Other DBs
NCBI-GeneID: 120479482
NCBI-ProteinID: XP_039527925
LinkDB
Position
Unknown
AA seq 263 aa
MSLLKNLSCHLILTLSLLTGADSADYYYIRRAKCTYSSPDFSDMTYIDSFYLNKRLFAKF
NSTLRKFVGFNEIGMIVAESWNNGTFVQTERNGVDACKYLFESEASRFLDKVVKPKVKVS
SVTRAGGNHPAVLMCSAYEFYPAHIKVSWLRDGKLMTSEITSTMEMANGDWYYQIHSELE
YTPKSGEKISCVVEHASFHKPMIYDWDPSLLESDRIKIAIGSFGLVLGIIISAAGLIYYK
KKLAGSVDIRRIQNIINLCTSSL
NT seq 792 nt   +upstreamnt  +downstreamnt
atgtcattgctaaagaatttgagttgtcatctcattttgacactgtctttattgactgga
gcagatagtgctgattactattacataagacgggcaaaatgcacctacagctctcctgat
ttcagtgacatgacgtatattgacagcttttacttaaataaacgtctattcgcaaagttc
aacagtactttgaggaagtttgtggggtttaatgaaattggaatgattgttgctgagagc
tggaacaatggcacctttgtgcaaacagagagaaatggtgtggatgcatgcaaatatctt
ttcgaatccgaggcctcacgtttccttgataaagtagtgaaaccaaaggttaaggtcagt
tcagtgactcgggctggtggcaatcacccagctgtgttgatgtgcagcgcttatgaattt
tatcctgcacacatcaaagtgtcctggctgagagatggtaaactgatgacctctgaaata
acctcaacaatggagatggctaatggagactggtactaccagattcactctgagctggaa
tacactcctaaatctggagagaagatctcctgtgtggtggagcacgccagcttccataaa
cccatgatttatgactgggatccgtctctcctagagtctgacagaattaaaatcgctatt
ggatcctttggtctggtgctgggaatcattatatcagctgctggactcatttactacaag
aagaaattagcaggctcagtggatattagaagaattcagaatataattaatctgtgtaca
tcatccctgtag

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