KEGG   Pimephales promelas (fathead minnow): 120479504
Entry
120479504         CDS       T08155                                 
Name
(RefSeq) HLA class II histocompatibility antigen, DP alpha 1 chain-like
  KO
K06752  MHC class II antigen
Organism
pprm  Pimephales promelas (fathead minnow)
Pathway
pprm04145  Phagosome
pprm04514  Cell adhesion molecules
pprm04672  Intestinal immune network for IgA production
pprm05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:pprm00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    120479504
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    120479504
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    120479504
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    120479504
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pprm04147]
    120479504
Exosome [BR:pprm04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   120479504
  Exosomal proteins of epithelial cells
   120479504
  Exosomal proteins of breast milk
   120479504
SSDB
Motif
Pfam: C1-set MHC_II_alpha C2-set_2 Ig_3 Ig_2 ig C2-set_3 I-set
Other DBs
NCBI-GeneID: 120479504
NCBI-ProteinID: XP_039527995
LinkDB
Position
Unknown
AA seq 234 aa
MELSVFMFMLVALVSSENKVVHEQFVLSGCSNTDKEFMYGVDGEERLYADFVKGVEVDAL
PDFVEHYPYPGFYDSASADIQICLANLDVAIKAYKNPQEKMDKPQTSIYTKNDVQLNVEN
VLICHVTGFFPPPVRVSWTKNNEVFKEDSLSQYRPNDDGTYNIFSSLKFTPVEGDIYSCT
VNHTSLEEPQTKTWDVEVPVPSVGPAVFCGVGLSLGLLGVAAGTFFLIKGNNCN
NT seq 705 nt   +upstreamnt  +downstreamnt
atggagctctccgtgtttatgttcatgcttgtcgctcttgtttcctcagagaataaagtt
gtgcatgaacaattcgttttaagtggatgctctaatacagataaagaatttatgtatgga
gtagacggagaggaacgactctatgcagactttgttaaaggagtagaagtagatgctctt
cctgactttgtagagcactatccctaccctggattctatgatagtgcttcagctgatatt
caaatttgcttagcaaacttagatgtcgctatcaaggcttataaaaatccacaagagaaa
atggacaaacctcagacttccatctatactaagaatgatgtgcagctgaatgttgaaaac
gtcctcatttgtcatgtgactggattcttccctcctcctgtcagagtctcatggactaag
aacaacgaggtttttaaagaagacagtctaagtcagtatcgcccaaatgatgacggcact
tacaacatcttctccagtctgaagttcacacctgtggagggagacatttacagctgcact
gtgaaccacacatctctcgaagaacctcagaccaaaacatgggacgtggaagttcctgta
cccagtgttggtccagctgtgttctgtggagtgggtctgtctctgggactgctgggagtc
gctgctggaactttcttcctcattaaaggaaacaactgcaactga

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