KEGG   Pimephales promelas (fathead minnow): 120479796
Entry
120479796         CDS       T08155                                 
Name
(RefSeq) H-2 class II histocompatibility antigen, E-S beta chain-like isoform X1
  KO
K06752  MHC class II antigen
Organism
pprm  Pimephales promelas (fathead minnow)
Pathway
pprm04145  Phagosome
pprm04514  Cell adhesion molecules
pprm04672  Intestinal immune network for IgA production
pprm05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:pprm00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    120479796
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    120479796
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    120479796
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    120479796
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pprm04147]
    120479796
Exosome [BR:pprm04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   120479796
  Exosomal proteins of epithelial cells
   120479796
  Exosomal proteins of breast milk
   120479796
SSDB
Motif
Pfam: C1-set MHC_II_beta C2-set_2 Ig_3 C2-set_3 Ig_2
Other DBs
NCBI-GeneID: 120479796
NCBI-ProteinID: XP_039528508
LinkDB
Position
Unknown
AA seq 253 aa
MSLQKLLCYHLIWTLAAFLVVESANVYYRYRLSRCIYSSSNISDMVYFNSYYFNTFLFIQ
FDSTLGRFVGFNEFGMKLAESWNRGPLVHKERAVVDWYCKGNAQVFDSAICEKSVKPQVK
LSSVTQAGGNHPAVLMCSAYEFYPPHIKVSWLRDGKLMTSEVTSTMEMADGDWYYQIHSE
LEYTPKSGEKISCVVEHASFHKPMIYDWDPSLPESERNKIAIGSSGLVLGIIIAAAGLIY
YKKKSTGRILVPH
NT seq 762 nt   +upstreamnt  +downstreamnt
atgtcactacaaaagctcttgtgttatcatctcatatggacactggctgcattccttgta
gtagaaagtgctaatgtatattaccgataccgactgtcaagatgcatctacagctcctct
aatatcagtgacatggtgtattttaacagctattatttcaatacatttctattcatacag
tttgacagcactctggggagatttgtggggtttaatgagtttggaatgaaacttgcggag
tcctggaaccgtggtcctttagtgcataaagaaagagctgttgtggactggtactgcaaa
ggtaatgctcaagtgtttgactccgctatctgtgagaaatcagtgaaaccgcaggttaag
ctcagttcagtgacgcaggctggtgggaatcatccagctgtgttgatgtgcagcgcatat
gaattttatcctccacacattaaagtgtcctggctgagagatggtaaactgatgacctct
gaagtgacctcaacaatggagatggctgatggagactggtactaccagattcactctgag
ctggaatacactcctaaatctggagagaagatctcctgtgtggtggagcacgccagcttc
cataaacccatgatttatgactgggatccgtctctcccagagtctgagaggaataaaatc
gctattgggtcctctggtctggtgctgggaatcatcatagcagctgctggactcatttac
tacaagaagaaatcaacaggaaggatcctagtacctcattga

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