Pimephales promelas (fathead minnow): 120479840
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Entry
120479840 CDS
T08155
Name
(RefSeq) Hermansky-Pudlak syndrome 6 protein homolog
KO
K20192
Hermansky-Pudlak syndrome 6 protein
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pprm04131
]
120479840
Membrane trafficking [BR:
pprm04131
]
Endosome - Lysosome transport
Others
BLOC-2 complex
120479840
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HPS6_C
HPS6
Motif
Other DBs
NCBI-GeneID:
120479840
NCBI-ProteinID:
XP_039528582
LinkDB
All DBs
Position
Unknown
AA seq
825 aa
AA seq
DB search
MTMLALEQVTDFGDFTKGKDLKEFFKREYSNISTQNCLSEVRLSPDGRHIHVIVRQPKSG
LMTYDKYQRAHLMQCQKHVDLVLTRNVPIVDVIYIPLSKPDDTAPVLGVIFENGKVEFWK
FLESRSGWHLLQTVDLCNSPRAKVVSVSVCQNFIIWCEERPPSENSSSVCSSFRFCICKK
TVEVNEGGVSLGNVKIALHNNPRYTTISSGDLVYLLPDMRENSSLDVSKVFLVWSPEHDT
FKVHSACSCTLMKSSSKESDFKRLVTDFIGLLPTLNPPKICGFSPTGCGDLLLLLSTGWV
CIMKRDGCLRNIYKLPDNCLSASGTQNSLNMYSEVLALTIGRTLFLIDTKCGLELERISL
KTEGLLFVNSLDSHSPQMLSETGLFVVTQTQKPSPTYSEDSSALLVEAVFEEACKYYQQR
SLSSTQLTVEKLKKGGMFQAPISLAAILRDYLSNQKTKTGEKHSSGQERLMSSLESELRS
LVLLENIKTSMVKASEKDLANYCETLVQQEICRLLGGELEKENLRYLNSIFQLFPTHSWH
AVQAVLHLRCNGEGSLSSKAPAELWKIILSPVQPTANFAHCNGQQKHTTVNLPVFELLCH
SIFKFQPSWLPRFLELAQQQMGTTSTSSWSYGVKESSESLPLYKRALTVLPCKGSNQHLE
VELLLCSERPKAIMQALRILIEQSQWERVTQVAERFCQKSPLLNKEIFSALLCEVSQHRD
LDPYLDLLWTLCPEDMTVTSILNIVLKNLPDSTQNSGPFEAHGSQVTIGLLKPLLRKVLQ
RETKPSHRYADILQSPTVPPLTPPRQPKGLSRDAEHKEAKQRTSS
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atgacgatgctcgcactggaacaagtgactgatttcggagattttacgaaaggaaaggat
ctaaaggagttttttaaacgagaatactccaacatctctactcaaaactgtctgtccgaa
gtgcgtctgagtccagatggacgtcacattcatgtcattgtgcgtcagcccaagagtggt
cttatgacatatgacaaatatcagcgagcccatttaatgcaatgccaaaagcacgttgat
ttagtgctaactcgaaatgttcctatagtggatgttatttatatccctctaagcaaacca
gatgatacagcccctgtgttgggagtgatttttgagaatggaaaagtagaattctggaaa
ttccttgagagcagatcaggctggcatctactccagactgtggatctgtgtaacagccct
cgtgcaaaagtagtttctgtgtctgtgtgtcaaaatttcatcatatggtgtgaggagcga
ccaccatctgagaactccagtagtgtgtgcagcagcttccggttctgtatctgcaaaaag
acagttgaagttaatgagggaggtgtcagtttgggaaatgtgaaaattgcattgcataat
aatcctcgatatacgaccatcagttctggcgatttggtctatctgctcccagacatgcgg
gaaaactcttcattggatgtttcgaaagtgtttcttgtatggtcacctgaacatgacacc
tttaaagtgcacagtgcctgtagttgcacacttatgaaaagctcaagcaaagaatcagac
ttcaaaaggcttgttacagacttcattggcctcctacccacactaaatccccctaaaatc
tgtggattctctcccactggatgtggagacctcctcctcctcctcagcactggttgggta
tgcattatgaagagggatggctgtcttcgcaacatatacaaacttcctgataattgccta
agtgctagtgggacccaaaacagtctgaatatgtatagtgaagtcctggcactaacaata
ggcaggaccctcttcttaattgacaccaaatgtggcctggaattagaaagaataagtctg
aaaaccgaaggtcttctctttgtaaactctttggacagtcactctccgcaaatgctgtca
gagaccgggttgtttgtggtcacgcaaacacagaagccttctccgacatattcagaagac
tcaagtgcactcttggttgaggctgttttcgaggaggcgtgtaaatactatcagcaaaga
agtctaagtagcacacagctcacggtggagaagctcaaaaaaggtgggatgtttcaagct
cccatatcgctggctgccatcctccgagattacctcagcaaccagaagaccaaaactggt
gagaaacattcctcgggtcaagaaaggctcatgagctcgctcgaatcagaacttaggagt
ctcgttttgctagagaacatcaaaacgtcaatggtgaaggcttctgagaaagatctagcg
aactattgtgaaaccttggtgcagcaggagatctgccggctgcttggcggtgaacttgag
aaggaaaatcttcgatacctgaacagcatcttccaactctttcccactcattcctggcac
gccgtgcaagcggttctgcatctgaggtgcaacggtgagggatcattgtcttctaaagct
cctgctgaattgtggaaaatcatcctcagccctgtgcaacccacagcgaactttgctcac
tgcaacggtcagcagaaacacactacagtgaacctgcctgtttttgagctcttgtgccac
tccatcttcaaattccagcccagctggctccccaggtttctggaattggcacaacagcag
atgggcacaacctccacatcttcctggagttacggtgtgaaggagagctctgagagtttg
ccgctctataaacgggccctgactgtgctcccttgcaaagggtccaaccaacacctggaa
gtggagctgcttttgtgcagcgagaggcctaaagcgataatgcaagcattgcggattctc
atcgaacaaagccagtgggaacgggtgacacaagttgctgagaggttctgccagaagagc
ccgcttctgaacaaagagattttcagcgctctgctgtgcgaagtgtcacagcatagagac
ctggacccttatttggacctgctctggactctttgtccagaggacatgactgtgacgagc
atactcaatattgtactgaaaaacctgccggattcgacgcagaactcgggaccgttcgaa
gctcacggcagccaggtcaccattgggcttttgaaaccgcttctcagaaaagttctccaa
agggagaccaaacccagccacaggtacgcagatattcttcagtcacccacagttcctcct
ctcacgcctccacgccagccaaagggactctccagagatgccgaacacaaggaagccaag
cagaggacttcctcttga
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