Pimephales promelas (fathead minnow): 120480812
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Entry
120480812 CDS
T08155
Symbol
gli2b
Name
(RefSeq) zinc finger protein GLI2b isoform X1
KO
K16798
zinc finger protein GLI2
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
120480812 (gli2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pprm03000
]
120480812 (gli2b)
Transcription factors [BR:
pprm03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
120480812 (gli2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2_15
zf-C2H2
zf-H2C2_2
FOXP-CC
Zap1_zf1
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
120480812
NCBI-ProteinID:
XP_039530154
LinkDB
All DBs
Position
Unknown
AA seq
1419 aa
AA seq
DB search
MEASVPSAAEKKDCKTSALEGNGFSEMPKKPSPSSLTRGPHHIFPTFHSPIPIDVRHHEG
RYHYEPHALHALHGPPGLAGSPVISDISLIRLSPGGAGESFLPPHSYVSPHMEHYLRSAH
ASPTLSMISAARGLSPADVAHEHLKDRGLFGLPPPPPGATPADYYHLMTAHRNPYGELLM
QGAGAAHLPEYFTPVDVSRFPSPRLTPRLSRKRALSISPLSDASIDLQTMIRTSPNSLVA
YINNSRSSSAASSSYGHLSVGGISPSFPFPHSINPVAYQQLLSQQRSLSAFGHTPPLIQS
SPAFSSRVPLSLSTLPTHTASDIDSKNTNGDSAVSSTVNPLNHKRSKVKTELDGPRPVSP
CSPDHLGGAQDLKEDLDECKHEAELVYETNCHWERCSKEYDTQEQLVHHINNEHIHGEKK
EFVCRWDECSREQKPFKAQYMLVVHMRRHTGEKPHKCTFEGCSKAYSRLENLKTHLRSHT
GEKPYVCEHEGCNKAFSNASDRAKHQNRTHSNEKPYVCKIPGCTKRYTDPSSLRKHVKTV
HGPEAHVTKKQRGDLPSRPHPPKENGENEAGTKLSGRTVDEKLEANSTTRAVEDYLQVKS
IKTENSMMYQSSPGGQSSCSSEPSPLGGAAHHDGGVEPTALSGGSMGDLSALDDAPLVDS
TVSTGMLGLHLRKNTSPAHRLTYLKQEKLKSVRDSCSWANPTPPAPSTKLPPINTSSLLE
SSGSLCDPGLSISSPRLGDLCPGETTVLSQLVERRDSLASNVSSAYNLSRRSSGISPCYS
SRRSSQTSQTGGRLNISSTGSYDPISTDLSRRSSEASHCGGIPSLLSLTPAQHYRLKAKY
AAATGGAPPTPLPNMESMSLKTRMALFGDSHEMATLPIHPPSVPRRCSDTSYANRSVLPH
EVTGNITRRASDPVRRVGPEQYALQQRYNSMTNVNQYPSLHHPGSSRHFSQINSLSEGNV
NRHQYPPRPSSISENVAMETMASDQNNDAMMSHDDIVQYLTSQNGDSTQHPGITYRYYPG
HGFGSLQQCHYQRRLALVEGNTNAVTQQTAAPSSQQTFPGSPNATKSQMPVQWNEVSSGT
VDSSHSQTKQGSGRGNLQQKQNLASFQNVNSNQQVGLMSHNLAHAAHVQRNNEFNSQRVN
QRQSLRQANTDQSIFLRGYNEGSASNDISGGLLSPPGKALTAQSGSVQNNRVRAQPVASQ
SHATFHGNNHGNYSQMNINQQGYIIPAQNPTLNGNHGLLQPRPPTEPKPYSRQLSVPTTT
AAQQLGYPQSNFSPAYDTSEASPKKSADGTDTNGIFYTGQIHMFESGSLEMTDAVQIGIV
MGSPETNQVSSTVDSNGAEHPQIDFDAMLDDGDHSSLISGTLSPSLLRSLSQNSSRLTTP
RNSVTLPPVPAGIGNMAIGDMSTMLTALAEESKFLDMMS
NT seq
4260 nt
NT seq
+upstream
nt +downstream
nt
atggaggccagtgtgcccagcgccgcagagaagaaggactgtaagacgtccgctctggag
ggaaacggcttcagtgagatgcccaaaaaaccttccccatcatccctgaccagaggccct
catcacatcttcccaactttccattctccgatccccatcgacgtgcgtcaccatgagggg
agataccactacgaaccccatgcgctccacgctttgcacgggcctccagggttagcgggc
agcccggtgatctccgacatctccctgatccgactgtctccagggggcgccggcgagtcc
ttcctccccccgcactcatacgtgtctccacacatggagcattacctgcgctcggcacac
gccagtcccaccctgtccatgatctcagcggcccgaggactgagccctgctgacgtggct
cacgagcacctgaaggaccgagggttgttcggtctgccccctccgccccccggcgccacc
ccggccgactattaccacctgatgacggcccacaggaacccgtacggagagttactgatg
cagggagccggggcggctcatctgcccgaatacttcaccccggtcgatgtgtcacggttt
cccagccctcgtctgacgcccaggttgagtcgaaagcgagcgttatccatctctccgctc
tcggacgccagcatcgacctgcagaccatgatccgaacatcacccaactctctggtggcc
tacatcaacaactcccgctccagctcggccgccagcagctcgtacggacacctctcagtc
ggaggaatcagcccttcattcccgttcccacactccatcaatccggtggcgtatcagcag
ctgttgtcacagcagcgaagcctcagtgcgttcggacacactccgccgctcatacagtcg
tcacccgcgttctccagcagggtcccactgagcctgtccaccctgcccacacacaccgcc
agtgacatcgacagcaagaacacaaatggagactctgcagtcagcagcacggtaaaccct
ctaaaccacaagaggtcaaaggtcaagacagagttggacgggccgcgacctgtgtcgccg
tgctctccggaccacctgggtggcgcacaggacctgaaggaagacttggacgagtgcaag
catgaggcggagctggtgtacgagaccaactgccactgggagcgctgcagcaaagagtac
gacacgcaggaacagctggtgcatcacatcaataacgaacacatccacggggagaagaag
gagttcgtgtgccgctgggacgagtgctctcgcgaacagaagccctttaaagcgcagtac
atgctggtggttcacatgcgcagacacaccggggagaaaccgcacaagtgcactttcgag
ggctgctctaaggcatactctcgtctggaaaatctgaaaactcacctgcgctcacacacc
ggagagaaaccctacgtgtgtgagcatgagggctgtaacaaggccttctccaacgcctcg
gaccgagccaaacaccagaaccgcacacactccaatgagaaaccctacgtgtgtaagata
ccgggctgcacgaagcgctacaccgatcccagctcgcttcggaaacacgtcaaaaccgtc
cacgggcccgaagctcacgtcaccaagaagcagcggggtgaccttccgtcgcgaccccat
ccgcccaaggaaaacggagagaacgaagcgggaaccaagctgtcggggcgaacggttgac
gagaaactcgaagccaacagcacaaccagagccgtcgaggactatctgcaggtcaagtct
ataaagacagagaactctatgatgtatcagtccagccctggtggtcagtcatcatgtagc
agcgagccgtcaccacttggcggtgccgcccaccatgacggtggagtagagccgacggca
ctcagcgggggcagcatgggagatctgagcgccctggatgacgcgccccttgtggattca
accgtctccacaggaatgttgggcctccatcttcgcaagaacaccagccctgcccacaga
ctcacgtatctgaagcaagaaaagctgaagtcggtgagggactcgtgctcctgggcaaac
ccaactcctcctgcccccagcaccaagcttccacccattaataccagttctttattggag
agttctggcagtctgtgtgatccagggctttccatctccagcccgcgcctgggcgatctt
tgtcccggcgagactacggttctaagtcaactggttgagcgtcgggacagtctggccagc
aacgtgagctcggcttacaaccttagccgtcgttcttccgggatctcgccctgctattca
agccgtcgatccagccaaacctcacaaactggtgggcgccttaacatcagctctaccggc
tcctacgaccccatttccactgatttgtctagaaggtccagtgaggccagccattgtgga
ggaatccccagtctgctcagtctgactcctgcccaacactacagactcaaagccaaatat
gctgctgccacaggcggcgcgccaccaacccctctacctaatatggagtctatgagccta
aagactcggatggccctatttggggattcccatgaaatggccacactccccatccatccc
ccttcagttcccagaaggtgtagcgataccagctacgccaaccgtagcgtcttgccccat
gaggtgacgggaaacatcactcgcagagcaagcgacccagttagaagagtaggtccggag
cagtatgccctccagcaacgttacaatagcatgaccaatgtgaaccaatatccgtcgttg
catcatcctggatccagccgacacttttcacagatcaacagcctgtctgagggtaacgta
aaccgccaccaatatccgccccgaccttctagcatttctgagaacgtggcaatggaaacc
atggcgagtgaccagaataatgacgcaatgatgtcacacgatgacattgttcagtacctt
acatctcagaatggagattccacccaacatccagggataacgtaccgctactatcctggt
catggctttgggtccctgcaacagtgtcattaccagagacgcctggccttggtggaaggg
aacacgaatgccgtaacgcaacaaacggcagctccaagctctcagcagacattcccaggt
tcacccaatgccactaagagccagatgccggtgcagtggaacgaggtcagttcagggaca
gtggattcatctcacagccaaaccaagcagggatcagggcggggaaacctccaacaaaaa
caaaacctcgcctcctttcagaacgtcaactccaaccaacaagttgggctgatgagtcac
aacctcgctcacgctgcccacgtgcaacggaataacgagtttaattcacagagggtcaac
caaaggcaatcgctacgacaggctaacacagatcagtctatctttctgcgtggttacaat
gagggttctgcttcaaatgatatcagtggaggtttgctgagcccgcctggtaaagcgctg
acggcacagtctggcagtgtccagaataacagggtacgagctcagccggtggctagtcaa
agccatgccacttttcatggaaataatcatggaaattattcccagatgaacatcaaccag
caaggctatatcattccagcccagaatcccacgctgaacggaaaccatggactgctacag
ccaaggccgcccacagaacccaaaccctacagccggcagctctcagtgccaacgacaact
gcagcgcagcaacttggttacccacaatccaactttagccctgcgtatgacacctctgag
gccagtcctaaaaaatcggctgacggcacagataccaatggtattttctacactggacag
attcacatgttcgagtccggcagtcttgagatgacagatgcagtgcaaatcgggatagtc
atgggctccccagaaacaaatcaggtctcgagcacagtggattcaaacggagcagagcac
ccccagatcgacttcgacgccatgctggacgacggcgatcactccagcctcatatcagga
actttaagccccagcctcctccgcagcctatcccagaattcctcccgtctcaccactccc
agaaactcagtgacgttgcccccggtgcctgcgggaatcggcaacatggccatcggagac
atgagcaccatgctgactgcgctcgcagaggaaagcaagttcctcgatatgatgtcatag
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integrated database retrieval system
