Pimephales promelas (fathead minnow): 120482385
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Entry
120482385 CDS
T08155
Symbol
fyco1b
Name
(RefSeq) FYVE and coiled-coil domain-containing protein 1
KO
K21954
FYVE and coiled-coil domain-containing protein 1
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
120482385 (fyco1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pprm04131
]
120482385 (fyco1b)
Membrane trafficking [BR:
pprm04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
120482385 (fyco1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RUN
FYVE
GOLD_2
EMP24_GP25L
Pullulanase_Ins
Motif
Other DBs
NCBI-GeneID:
120482385
NCBI-ProteinID:
XP_039532598
LinkDB
All DBs
Position
Unknown
AA seq
1335 aa
AA seq
DB search
MSTVGENQLQRIIRDLHDAVSELSKEHCETGEPVTDDSSSLHKFCYKLEYLLQFDQKERT
TFLGSRKDYWDYFCDCLSKIKGANDGIRFVKSIPELKTSLGKGRAFIRYGLVHQRLADTL
QQCLMNYKITCEWYYERSPFLKSHLNIDIINHLYELNEVQFDVASRGHDLDSDWPTFARR
TLGSAVSSAHVWKPPSRCSSVNSLVSSYSQQAQEFLPGQEFGSSLLGDLGELGELSCSPS
EDLRIELDQSELRQQELQEKVHQLTSEAADLRAVLSDLQEQLLAKRPNQEKEGEQSSGEA
LHTTQQELESLQTSERKLEAKLSIAENRNMELLSKLDGALSEKGQQAANYCDSAWTIQEL
LTKLKEAEEERIESKRESEDRARLAERLAQDLTLQEEKVKEMKGKLDTCRVSADKERTTA
KQQADELQVTINRLQGDLSLKERETGNLQTQLQDLQKALEAQESQLEEHKKRMQDELQHK
SVLEEKLNAKLNELSISTQKIRQLENHNQRLTAESQSFQGQAKKLEEYKTQCTSLMEINA
KLIQTVKRHEDSSKELAQTKTALERELITAQAYERQLMSRLESTGLTVENRNLDKCIQNG
QTEFEQIAEKSISSVEELDDSATVPQQRTSRQLLEAVESSRSENGESTSRLALAEAQLEL
NMKEVSRLQEEVMELRAQLLVSSEERMKIQALQEVTEASREDLRAQTEQLKSQVEELNRR
HVDQLLRCHEREDALVKERDMEAKARSEIQTNITAMREELNLLKKQNSTLVFENGEACEA
LHRANTETAELGVHVCMLTGQNEEAQLRWEELSTKLQELQMEAQEEVETLSESMKAMSEE
NARLQEQLKQTEGLPEAMQKLQERLEQVEEEAGSLQEIRQREGDTLRSQLSDEAAHHQSQ
VQGLNEELDALRKRLENEVEKVSSLESKVLELESVNSQMIEKKNALADDYETIIHQKEEQ
IKNLRLDLSRSEKELALAQQSCHELGVNLSRSAMEKHDIELKMSAEIDDLYRTKKNLGER
LIELLREKDALWQKSDALEFEQKLRAEEQTDRDVTYCLSCRNNFGWMLHRHNCRLCGRPF
CYYCCNYAVSVQGGGKERCCKDCFTQHSTGQERLLRSMSSPTRTSTPRVPGVLRSPRPDD
AAYDIITEEEVNRVHDSDLYYTALSPETEQLSSSDIASTEDSDELIGSVQDAEICLLKSG
EMTLSVPFSVKDVNEFGDMSRELFIKSGCYSVILITAAHPGPTISWVFSSEPKSIAFSVV
YRENADTPLEEAKVLIPLTRCKSHKETIQGQLKVRNTGEYTLIFDNSFSRFVSKKVLFKL
SIEKTEEANGNDCSS
NT seq
4008 nt
NT seq
+upstream
nt +downstream
nt
atgagcacagtgggagaaaaccagctgcagagaataatccgagatctgcatgatgcagtt
tctgagttgagcaaagaacattgtgaaactggagagcccgtcaccgatgacagttccagt
cttcacaagttctgctataaactggagtacctactgcaatttgaccagaaagagagaacc
acatttctgggcagcaggaaagactactgggactatttctgtgactgcttgtccaagatt
aaaggagctaatgacggcattcgctttgtcaaatcaatccccgagctgaagacgtcattg
gggaaaggacgggctttcatccgctacggtctggtgcaccaaaggctggcagacactctt
cagcaatgtcttatgaactacaaaatcacctgtgagtggtattatgaacgcagtcccttc
ttgaagtcccatctgaacatcgatatcatcaaccacctgtatgaactcaatgaggtccag
tttgatgtagcatcccgaggtcatgaccttgactctgactggcctacctttgctagaagg
actttgggttcagctgtctcatctgcccatgtgtggaaaccacccagtcgctgctcaagt
gtcaacagtctggtcagcagttactcacagcaagctcaggagtttcttccaggccaagaa
tttgggtccagtctgctaggtgatctgggtgagttgggcgagctgtcttgtagcccttct
gaggacctacgcattgagcttgaccaatctgagttgagacaacaagagctccaagagaag
gttcatcagctcaccagtgaggcagctgatcttagagccgtgctcagtgacctacaggaa
caactcctggctaaaagacctaatcaagagaaagaaggagaacagtcctcaggggaggct
ctccataccacccaacaggagctggagtctctgcagacatcagaacgcaagctagaagcc
aagctgagcattgcggagaacaggaacatggagttgctgtcaaagcttgatggagctctg
agcgaaaagggacagcaggccgccaactactgcgactcagcctggacgatccaagagctc
ctgaccaagctaaaggaggctgaagaagagaggattgagtctaaacgagagagcgaagac
cgagctagactagctgagcgacttgcccaggatctgacgcttcaggaggagaaagtaaag
gagatgaaaggaaaactggacacatgtagagtttccgccgacaaagaacgaacaactgca
aagcaacaggctgatgagctgcaggtgaccattaaccgccttcagggagatctatctctg
aaggagcgggaaactgggaatctccagacacagcttcaggacttgcaaaaggcattggag
gcccaggagagtcaactggaggagcacaagaaaaggatgcaagatgagttgcaacataaa
agtgtgcttgaagagaaactaaatgcaaagctgaatgagttatccatcagtacccagaag
attcggcaactggagaatcacaaccagcggttgactgcagagagtcagagctttcaaggg
caagccaagaaactggaagagtacaagacccagtgcacaagtttaatggagatcaatgcc
aagctcatccagactgtgaaaagacacgaggacagcagcaaagagctggcacaaaccaag
accgctctagagagagaactgatcactgcacaggcctacgagaggcaactgatgagcaga
ctggagtcaactggactgactgtagagaaccgaaatctggacaagtgcatacagaacggc
caaactgaatttgaacaaattgcggagaagagtatatcgagcgtggaagaattagatgac
agtgccacagtcccacagcagagaacatctagacaactacttgaagccgttgaatcctca
agaagtgaaaatggagaatccacttccaggttggctctggctgaggcccaacttgaactc
aacatgaaggaggtttccagacttcaggaggaggtcatggagctccgggcacagctattg
gtgagctcagaggagaggatgaagatccaggctctacaggaagtgacagaagcctccaga
gaagacctccgtgcccagacggagcaacttaagtcccaggtggaagagctaaaccgtagg
catgtggatcaactgctacgctgccatgaaagagaggacgctctggtaaaagagagggat
atggaggccaaggcacggtcagaaatccaaacgaacattactgccatgagggaagagctt
aatttgttgaaaaagcagaacagcacgcttgtgtttgagaatggagaggcttgtgaggcc
ttacatagggccaacaccgagacagcagagctcggggttcacgtttgcatgctgacgggc
cagaatgaggaggctcagttgcgatgggaggagctttctaccaaactgcaggagctacag
atggaggcacaagaggaggtggaaactctaagtgaatcgatgaaggccatgagtgaggag
aatgcaagactccaagagcagctaaagcagacagagggactcccagaagccatgcagaag
ttgcaggagagacttgaacaggtagaggaagaggccggaagcctccaagagatccggcag
agggaaggggacacactgaggtctcagttgagcgacgaggcagcgcaccaccaaagtcaa
gtacagggtctgaatgaggaactggatgcactaaggaagagattggaaaacgaagttgag
aaagtctcaagtcttgagtccaaagtgttggagcttgagtctgtcaacagtcagatgatc
gaaaagaaaaatgccctcgctgatgattatgaaactataattcatcagaaagaggaacag
ataaaaaacctgagactggacttatcaagatctgagaaggaactggcacttgctcagcag
tcctgtcatgaactgggggtgaacttaagcagaagtgcaatggagaagcatgacattgaa
ctgaagatgtctgctgagatagatgacctttatcgtaccaagaagaacctgggggagaga
cttattgagctcctaagggagaaagatgctttatggcagaagtcagatgcactggagttc
gaacagaaactgagagctgaggaacagaccgacagagacgtcacatactgcctgagctgc
cgcaataacttcggctggatgctgcacagacacaactgcaggctatgtgggcgcccattc
tgttactactgctgcaattatgctgtgagtgtccaaggcggtggtaaggagcgctgttgt
aaggactgcttcactcagcacagtactggacaagagcgtcttttacgctcaatgtcaagc
ccaacccgaaccagcacacctagagtccctggggtactgaggtcccctcggccagatgac
gcagcgtatgacatcatcacagaagaggaggtgaaccgtgtccatgacagcgacttgtac
tacactgcactgtcaccagagacagaacagctgagcagcagtgacatcgccagcacagaa
gattcagacgagctgattggctcggttcaggatgctgagatctgcctgctgaagtctgga
gagatgacgctgtctgtgccgttcagtgtaaaggacgtgaatgagtttggcgatatgtcc
agagaactcttcatcaagtccggctgttacagtgtcattctcataaccgctgcacatccg
ggccctacgatcagctgggtcttctcctctgaacccaagagcatcgccttcagcgtggtg
tacagagagaacgcagatacgcctctagaagaggccaaggttctgatccctctgacaaga
tgtaaatctcataaggaaacaattcagggtcagttgaaggtcaggaacactggagaatac
acccttatctttgacaactcattctcaaggttcgtctcaaagaaggtcctgttcaaactg
agcatagagaagacagaggaagccaatggaaatgattgttcttcataa
DBGET
integrated database retrieval system
