Pimephales promelas (fathead minnow): 120482616
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Entry
120482616 CDS
T08155
Symbol
hmgcs1
Name
(RefSeq) hydroxymethylglutaryl-CoA synthase, cytoplasmic isoform X1
KO
K01641
hydroxymethylglutaryl-CoA synthase [EC:
2.3.3.10
]
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm00280
Valine, leucine and isoleucine degradation
pprm00650
Butanoate metabolism
pprm00900
Terpenoid backbone biosynthesis
pprm01100
Metabolic pathways
pprm03320
PPAR signaling pathway
Module
pprm_M00095
C5 isoprenoid biosynthesis, mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
120482616 (hmgcs1)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
120482616 (hmgcs1)
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
120482616 (hmgcs1)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
120482616 (hmgcs1)
Enzymes [BR:
pprm01000
]
2. Transferases
2.3 Acyltransferases
2.3.3 Acyl groups converted into alkyl groups on transfer
2.3.3.10 hydroxymethylglutaryl-CoA synthase
120482616 (hmgcs1)
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Motif
Pfam:
HMG_CoA_synt_C
HMG_CoA_synt_N
PS_Dcarbxylase
Motif
Other DBs
NCBI-GeneID:
120482616
NCBI-ProteinID:
XP_039533043
LinkDB
All DBs
Position
Unknown
AA seq
522 aa
AA seq
DB search
MIVSPFRMPGSLPAVCEAAWPKDVGILAMEVYVPSQFVDQAELEEYDGVGAGKYTVGLGQ
ARMGFCSDREDINSLCLTVVQRLMERSGLSYDSVGRLEVGTETIIDKSKSTKTVLMQLFE
ESGNTDVEGVDTTNACYGGTAALFNAINWVESSSWDGRYAVVVAGDIAVYATGSARPTGG
AGAVAMLVGPNAPLAFERGLRGTHMQHAYDFYKPDMVSEYPVVDGKLSIQCYLSALDRCY
SVFRNKIHAQWQREGVERRFSLEDFGFMVFHSPYCKLVQKSLARLMLNDFMSHPCPNTES
GPFSGLEAFRDVKIEDTYFDRDVEKAFMKASSELFENKTKASLLISNQNGNMYTPSVYGC
LASVLAQHTPQHLAGQRIGVFSYGSGFAATLYSIRVTQDATPGSALDKMVSSLCDLQARL
DSRTKVSPGVFAENMKLREETHHLANYIPQGSVEDLSPGTWYLTRVDEKHRRQYARRSMN
DHRSLEAGLLTAAEHIPSPLKKMPRIPTTTAGPEVVVSNGDH
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgattgtaagtccattcagaatgcctggatccctccctgcagtttgtgaggccgcgtgg
cccaaagatgtgggcatcttggccatggaggtctacgtgccctcacagttcgttgaccag
gccgagctggaggagtacgatggcgtcggggcggggaagtacactgtcggcctgggacag
gcccgcatgggcttttgctcagaccgggaggacatcaactccctgtgcctgacggtggtc
cagcgcctgatggagaggagcggcctgtcctacgacagcgtgggccggctcgaggtcggc
accgaaaccatcatcgacaagtccaagtccactaagacggtcctgatgcagctgttcgag
gagtcgggcaacaccgacgtggagggagtggataccaccaacgcctgctacgggggaact
gccgcactcttcaatgccatcaactgggtcgagtccagctcctgggacggtcgctatgct
gtggtcgtcgctggtgatattgcggtgtacgccacgggcagtgccaggcctacagggggc
gccggagccgtggccatgttagtgggacccaatgcccctctggcctttgagagagggctt
cgtgggacacacatgcagcatgcgtatgatttctataagccagatatggtctccgagtat
ccagtggtggacggcaagctctccatccagtgttacctcagcgctttagaccgatgctac
tccgtcttcaggaacaagatccacgcccagtggcaaagagagggtgttgagcgccgcttt
agtctggaagattttggcttcatggtcttccactctccttactgcaaactggtccagaag
tctttggctcgcctaatgctcaacgatttcatgagtcacccatgtccaaacacagagagc
gggcccttcagcggattagaagctttcagagacgtgaagattgaggacacttatttcgac
agagatgtggagaaggcctttatgaaagccagttcagaactgttcgagaataaaaccaaa
gcatctctccttatatccaaccagaacggcaacatgtacacaccgtcagtgtacggctgc
ttggcttcagttctcgcacaacacacaccgcagcacttggcaggccagaggatcggtgtg
ttttcttacggctcaggctttgctgccacactctactccatcagagtcacacaagacgcc
acacctggctctgctctggacaagatggtctccagcctgtgtgacttgcaggcccgactg
gactccagaacgaaggtttcaccgggggtttttgctgagaacatgaagctccgagaagaa
acccaccatttagcaaactacatccctcaaggctctgtggaggacctctccccgggaaca
tggtacctgacccgtgtggacgagaagcatcgcagacagtacgccaggcgctcgatgaac
gaccacaggtctctggaggcaggactgctcactgcagccgagcatatccccagcccgctc
aagaagatgccccgtatcccaactaccacagctggccctgaggtggtcgtcagtaacggg
gatcattaa
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