Pimephales promelas (fathead minnow): 120482729
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Entry
120482729 CDS
T08155
Symbol
pbx1a
Name
(RefSeq) pre-B-cell leukemia homeobox 1a isoform X1
KO
K09355
pre-B-cell leukemia transcription factor 1
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
120482729 (pbx1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pprm03000
]
120482729 (pbx1a)
Transcription factors [BR:
pprm03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
120482729 (pbx1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PBC
Homeobox_KN
Homeodomain
UCH
GAIN
DUF7260
LZ3wCH
Motif
Other DBs
NCBI-GeneID:
120482729
NCBI-ProteinID:
XP_039533245
LinkDB
All DBs
Position
Unknown
AA seq
428 aa
AA seq
DB search
MDDQPRLMHSSHGVGMAGHPGLAQHMQDGTGGADGEGRKQDIGDILQQIMTITDQSLDEA
QARKHALNCHRMKPALFNVLCEIKEKTVLSIRGAQEEEPPDAQLMRLDNMLLAEGVSGPE
KGGGSAAAAAAAAATGGSGSDNSAEHSDYRAKLTQIRQIYHTELEKYEQACNEFTTHVMN
LLREQSRTRPISPKEIERMVNIIHRKFSSIQMQLKQSTCEAVMILRSRFLDARRKRRNFN
KQATEILNEYFYSHLSNPYPSEEAKEELAKKCSITVSQVSNWFGNKRIRYKKNIGKFQEE
ANMYAARTAATATNVSTHGSQANSPSTPNSAGSAGSFNMNSGDLFMSVQSLNGDSYQGAQ
VGANVQSQVDTLRHVISQTGGYSESLAASQIYSPQGLNANGGWQDAPTPSSVTSPTEGPG
SVHSDTSN
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atggatgatcagccccggttgatgcactcctctcacggggtgggcatggccggacacccc
ggcctggcgcagcatatgcaggatggcacgggaggagcggacggcgagggaagaaaacag
gacattggagacatattacaacaaatcatgaccataaccgaccaaagtctggacgaggca
caggccaggaaacatgcactgaactgtcacagaatgaagccggctctattcaatgtcctg
tgtgaaataaaagaaaaaacagtactcagtatccgtggagctcaggaggaggagccacca
gatgctcaactcatgcgattggacaacatgctgctagccgagggcgtgtccggtcccgag
aaagggggcgggtcggctgccgctgccgccgccgccgctgcaacaggtggttccgggtcc
gataactcggccgaacactcagactaccgggccaagctgacccagatccgtcagatctac
cacacagaattggagaagtatgagcaggcgtgtaacgagttcaccacccacgtgatgaac
ctgctgagggagcagtctcgcactcggcccatctcccccaaagagatcgagcgcatggtg
aacatcatccatcgcaagttcagctccatccagatgcagctcaagcagagcacctgcgag
gcggtcatgatcctgcgctcccgcttcctcgacgccagacgaaaaaggagaaacttcaat
aagcaggccacagagatcctgaacgaatacttctactcccacctaagcaacccgtacccc
agcgaagaggccaaggaggagctggcaaagaaatgctccattacagtctcacaggtatct
aactggtttggaaataagagaattagatacaagaaaaatattggaaaattccaagaagaa
gccaacatgtacgctgccagaaccgccgctaccgcaaccaacgtctccacccacggcagc
caagccaactcgccttccacaccaaattcagctggttccgctggctcttttaatatgaac
tccggggacttgttcatgagtgtgcagtctctgaatggggactcataccagggggcccaa
gtgggggccaacgttcagtcacaggtggatactcttcgccatgttatcagtcagacaggc
ggatacagtgaaagcctcgctgccagtcagatatacagtccacagggcctcaatgcgaac
ggcggctggcaagacgccccgacaccctcctcagtgacctcgcccacggaaggacccggg
agtgtccattccgacacttccaactga
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