Pimephales promelas (fathead minnow): 120482735
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Entry
120482735 CDS
T08155
Symbol
smpd1
Name
(RefSeq) sphingomyelin phosphodiesterase
KO
K12350
sphingomyelin phosphodiesterase [EC:
3.1.4.12
]
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm00600
Sphingolipid metabolism
pprm01100
Metabolic pathways
pprm04142
Lysosome
pprm04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
120482735 (smpd1)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
120482735 (smpd1)
09143 Cell growth and death
04217 Necroptosis
120482735 (smpd1)
Enzymes [BR:
pprm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.12 sphingomyelin phosphodiesterase
120482735 (smpd1)
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Ortholog
Paralog
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Motif
Pfam:
Metallophos
ASMase_C
SapB_1
Motif
Other DBs
NCBI-GeneID:
120482735
NCBI-ProteinID:
XP_039533265
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All DBs
Position
Unknown
AA seq
597 aa
AA seq
DB search
MKRPGFGLSTFSGVFVVWTLFSVLIVFSYPLEGDQEAHELRFVEEFDRLKLGFSWHNMSC
AVCKAIFATVDIALLSDSNKERVAHVLGDACVRLHLADPDVCREITELFREDFIRALQES
FLWPTEACALLVGPACGHFDIYAPWNVSLPQVPKPPIKPHTPPKPGSPQSRILFLTDIHW
DAEYAQGSLVDCKKPLCCRNDSGRASWKHSGAGYWGTYGKCDLPLRTVENLLQTVAKSGP
WDWVYWTGDIPAHNVWSQSRKQQLNELTVITRLILKHLGPNVTVYPSVGNHESTPVNSFP
PPFVHGNRSSRWLYDTMAKEWASWLPEEALETLRLGGFYTVEIQRGLRLVSLNMNFCARE
NYWLMVNSTDPADQLQWLIHILQESENKGEKVHIIGHIPPGLCLSSWSWNYYHIVNRYES
TITGQFFGHTHVDEFQMFYDEETMTRPLSVAFIAPSVTTYVNLNPGYRVYYVDGNYPGSS
RMVLDHETFILNLTLANKRHSKPYPSPSWTLLYRASEAYGLSTLFPADMDGLIKIMVNDD
RVFQRFWYLFHKGHVSKPCTDTCKTSLICLLHSGRYDVLMQCDVLHGDKHSFRKTMC
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgtccaggtttcgggttgtccaccttcagcggtgtcttcgtggtctggacattg
ttttcggtgcttattgtcttctcataccctcttgaaggtgatcaagaggcgcacgagctg
cggttcgtggaggagtttgatcggttgaagctcgggttcagctggcacaacatgtcctgc
gcggtgtgtaaagcgatcttcgccacggttgacatcgcgctgctgagtgactcaaacaag
gagcgtgtggcccatgttctgggagatgcctgtgtccgactgcacctcgctgatccagat
gtatgccgagagatcactgagctcttccgagaagatttcatccgtgcgctgcaggagtcc
ttcctctggcccacagaggcttgcgctctgctggttggacctgcgtgtggccattttgat
atttatgccccctggaatgtatccctgccacaggtccccaaacccccaattaaaccacac
acccctcccaaaccaggctctccacagagcaggatcctgttcctcacagatatccactgg
gatgcggagtacgctcaaggcagccttgtggattgtaagaagccactgtgctgtcggaat
gactccggaagggccagttggaagcacagtggagccggatactggggcacatatggcaaa
tgtgacctgcctctacgcacagtggagaatctcctccaaaccgtagccaaatccggccca
tgggattgggtgtactggacaggagacatcccagcacacaacgtctggtctcagtcccgg
aaacaacagctgaacgagctcaccgtcatcactagactgatactcaaacacctggggcct
aatgtaaccgtgtacccatctgtggggaatcacgagagcacgccggtgaatagtttccca
cctccgtttgtacatgggaatcggtcgtcccgctggctgtatgacactatggcgaaggag
tgggcatcctggcttcctgaggaagcgctcgagaccttacgccttggagggttctacact
gtggaaattcagcgtggtttgaggctggtgtctctgaacatgaacttttgtgcacgagag
aactactggctgatggtgaactccacagacccggccgatcagctgcagtggctcattcac
atactacaagagtctgagaacaagggagagaaggtccacatcatcggtcacattcccccg
ggtctctgcctgagcagttggagttggaactactatcatatagtcaacagatatgaaagc
accataactggtcagtttttcggacacactcacgtcgatgagtttcagatgttctatgat
gaggaaacgatgacccgtccactgagtgtggctttcattgccccgagtgtgaccacttat
gttaacctgaacccaggatatcgtgtttattacgtggatggaaactacccaggcagcagt
cgcatggttttggatcacgagacctttattctcaacctgactcttgccaacaaacggcac
tcaaaaccctaccccagcccgtcatggaccttgctgtaccgtgcctctgaggcctatggc
ttgtccacactcttcccagcggacatggacggtttgatcaaaatcatggtgaatgatgac
cgtgtcttccagcgcttctggtacctctttcacaaaggccacgtgtcaaagccctgcaca
gacacttgcaagacttcactaatctgtctcctgcacagcgggcgatacgacgttttaatg
caatgtgatgtgctacacggagataagcactcttttaggaagacaatgtgttga
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