Pimephales promelas (fathead minnow): 120483561
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Entry
120483561 CDS
T08155
Symbol
tiam1b
Name
(RefSeq) T-lymphoma invasion and metastasis-inducing protein 1 isoform X1
KO
K05731
T-lymphoma invasion and metastasis-inducing protein 1
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04530
Tight junction
pprm04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
120483561 (tiam1b)
09142 Cell motility
04810 Regulation of actin cytoskeleton
120483561 (tiam1b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH_Tiam1
RhoGEF
Tiam_CC_Ex
PH
RBD
PH_9
PDZ
SOS1_NGEF_PH
PDZ_6
PDZ_2
DH_Alsin
Motif
Other DBs
NCBI-GeneID:
120483561
NCBI-ProteinID:
XP_039534579
LinkDB
All DBs
Position
Unknown
AA seq
1580 aa
AA seq
DB search
MGNTESHSGGHGYYGAGQRHLSRKHMSRSLRLSSKQTYCSRRTPSGKPEHRNSETSTRSS
STPSIPQSLADHGLEPFNDSDMLPDFSGPIWVDRVAMNLRPVSFHNHPAHSPTPSHTGTA
KQASQDDAKPPEDATLHTRDGSQDGSSFKKKRSKSADMWREDSLEVSLSDMSQEHLTSTE
EIGDTPEDCEAGRQELLDSNRANSLDGLYGPKSPTCRPTHGRYAKWHKGGTTSREGDEDK
MISPCEDDGAAYAAYTLPCRRSHCLSEGPTNQQGAMQGRRAQTIQDVTAGDGSDYEDSGI
DGLTGDSEASQHQARRYKTMSASFSVYSTSAGGVFTGSDSGSSSGAGAGPSDGTQGVYEN
FRQELEQNVSPAEVPEKRSSAFSDEQSSVTLSSAYHTDPLLNVAAVQGTVRKAGRLAVKN
FLVHKKNKKVELAPRRKWKSYWVSLKGCTLFFYETDGRSGIDHNSIPKHAVWAENSIVQA
VPEHPKKDFVFCLSNSLGDSFLFQTCSQTELENWITAIHSACAAAFARQHHREDTVRLLR
AEIRKLEQKIDMDEKMKKMGDMQLSAVTDSKKRKTILEQIFLWEQNLEQFHMDLFRFRCY
LSSLQGGELPNPKRLLAFASRPTKLAMGRLGIFSVSSFHALVAARTESGVRRRTQAMSRS
TSKRKSRFSSLWGLDTHSKRKSKGHPSINQVFAEGDDPVKSPLEGMFEGSASETTKDAKT
PVKGLPRASTDHDIWSRDHLTPSWVLLPNDQPVLAIIQPGESALDMLDTICKAHQLDATK
HYVRLKFLIENQVLFYIPKPEEDIYDLLYKEIELCCKIRKVIQFDRDESCMIGYGFSISV
VEEDSVQQLYITDVRAGGLAFAKGLNAGDEILQLNGKDSRTLTFADMKVAFAQVSLSLTV
NTLPPVERRQLCFLPPRRSDAVDNLYTDIFSQSQEEILDDGVGLIVDSSGDGLDDDSELF
AEFDEYGKSTEQVAAFCRSLHEMNPSSEVVSPSSGPESSSLLPSNATPRQLSDADKLRKV
ICELVETERTYVKDLNCLIGRYLTPLQKESFLTQDELDVLFGNLLEMLEFQVEFLKTLED
GTRLVPDLEKLERVEEFKKILFSLGGSFLYYADRFKIYSAFCASHTKVPKVLVKAKTDAA
FKAFLDERNPKQQHSSTLESFLIKPIQRVLKYPLLLRELHSLTDPDSEEHYHLNVAMKAM
NTVASHINEMQKIHEEFGAVFDLLISEQTGEKKEVADLSMGDLLLHTSVTWINPSSSLGK
CKKEPQLATFVFKTAVVFICKDYSKQKKKMGGSHRASVSGEEKDPFRFRHMIPTDALQVR
TLSNTDGDNAAVCEIIHVKSESEGRPERVFQLCCSSSESKKDFLKMVHSILRDKQRRQLL
KTESLPPNQQYVPFGGKRLCALKGARPAMNRAVSAPTRTLGRRKLVRNRFTIDTDIVFDT
EPDSDSPDSQHAQEQSVIPAGDTDRWVEEQFDLQRYEEQEHDVKETDILSDDDDFSQSAL
SPSTEPDLEGPLSALSLEGDTEEEEDEEAENKKDYKSHHAKLSHVGKQCAMSVASVDEQA
LPDEVIWVRRDSSAENETQS
NT seq
4743 nt
NT seq
+upstream
nt +downstream
nt
atgggtaacacagaaagccatagtggcgggcatggttattatggagccggtcagcggcac
ctctcccgtaagcacatgtcccgctcgctccgtctgtccagcaagcagacgtactgttcc
cgccgaacgccttccggaaagccggagcaccgcaactccgagaccagcacgcgctccagc
agcactcccagcatccctcagtcactcgcggaccacggcctggagcccttcaacgactcc
gacatgctccccgacttcagcggccccatttgggtggaccgtgtggccatgaatctcaga
cccgtgtccttccacaaccatccggcacattctcccacaccgtcccacaccggcaccgct
aaacaggcctcacaggacgacgccaagcccccagaggacgcgactctgcacactcgggac
ggctcccaagacggctccagcttcaagaagaagcgctccaagtctgcggacatgtggagg
gaggactcgctggaggtgtccttatccgacatgagtcaggagcacctgaccagcaccgag
gagatcggagatactcctgaagactgtgaagccggccgccaggagctgctggactcgaac
cgcgccaattccttagacgggctctacggacccaagagtcccacctgcaggccaacacat
ggacgctatgccaaatggcacaaaggtgggactacgagcagagaaggggacgaggataaa
atgatctcgccctgtgaggacgacggcgccgcttacgccgcgtatacactgccctgccga
cgctctcactgtctgtccgagggacccaccaatcagcaaggagccatgcaagggaggcgg
gcgcaaaccatacaggatgtcacggctggagacggcagtgattatgaggacagcggtatc
gacgggctgacgggggacagcgaggcgtctcagcatcaggctcgccgctataagaccatg
tccgcgtcgttctccgtctactccacgtcagcagggggcgtcttcaccgggagcgacagc
gggagcagcagcggggccggagcggggccctccgatggcacacagggagtgtatgagaac
ttccgtcaggagctggagcagaacgtgagcccggccgaggttcccgagaagagaagctca
gcgttcagcgatgagcagagcagtgtgaccctgagctccgcctaccacaccgacccgctg
ctgaacgtggccgccgtgcaggggacggtgcgcaaagctggacgcctcgccgtcaaaaac
ttcctggtgcataaaaagaacaagaaggtggagctcgcccctcgccgcaagtggaagagc
tactgggtgtccctcaaaggatgcactctgtttttctacgagacagacgggcgatcgggc
atcgatcacaacagcatccctaaacatgccgtgtgggccgagaacagcatcgtccaggcc
gtcccagaacaccccaaaaaagatttcgtattctgcctgagtaactctcttggagactcc
tttctttttcagacctgcagtcagacagagcttgaaaactggatcacggccatccactca
gcctgtgccgcggccttcgcccgccagcatcaccgcgaggacacggtgcgtctgctgcgc
gcggagatacggaagctggagcagaagatcgacatggatgagaagatgaagaagatggga
gacatgcagctctccgctgtcaccgactccaagaagaggaagaccattctggagcagatt
ttcctgtgggagcagaatttagagcagttccacatggatctgtttcggtttcgctgttac
ctgtccagcctgcagggcggcgagcttcccaaccccaaacgcctgctggccttcgcctcc
cgacccaccaaactggccatgggccgactgggcatcttttcggtctcctccttccatgcg
ctggtggcggctcgcactgagagcggcgtgaggcgaaggacacaggcgatgtcacgctcc
accagcaaacgcaagagtcgcttctcctcactgtggggtctggacacccactccaagaga
aagagtaaaggtcatcccagcattaaccaggtttttgcagaaggagatgatccagttaaa
agtcctctagaaggcatgtttgagggttctgctagtgagacaacgaaagacgccaagacc
ccagtgaaaggtctgccaagagccagcacggatcatgacatctggtccagagaccacctc
actccatcatgggtgttgctgccaaacgaccagcctgtgttagccatcatccagcccgga
gagtcagccctcgacatgctggacactatctgcaaggctcaccaactggacgccactaaa
cactacgtgcggcttaagttcctcattgagaaccaagtgctgttctacatccccaaaccg
gaggaggatatttatgatctgctgtataaggaaatcgagctgtgctgtaagatccggaag
gtgatccagtttgatcgggatgaatcctgcatgatcggctacggtttttccatctctgtg
gtggaggaggacagcgtgcagcagctctacattactgacgtgagagctggaggattagcg
ttcgccaaaggtctgaacgcaggagacgagattctccagctgaacgggaaggactcccgc
actctgaccttcgctgacatgaaggtggcgttcgctcaggtctctctctctctcaccgta
aacacactgccccctgttgagcgccggcagctctgcttcctcccgccgagacgctcggac
gctgtggacaacctctacacggacatcttctctcagagtcaggaggagattcttgacgat
ggcgtgggtctgattgtggactcttcaggagacggtttagacgacgactcggagctcttc
gctgagttcgacgaatacggaaagagtacggagcaggtcgcagctttctgtcgcagtctt
cacgaaatgaatccctcatccgaagtcgtctctccatcgtccggcccggagtcttcctcg
ctccttccgagcaacgccaccccgcgccagctgtccgatgcagacaaactccgcaaagtc
atctgcgaactggtggagacggagcgcacctatgtcaaagatctgaactgtttgatcggg
cgatatctaacccctctgcagaaggagtctttcctcactcaggacgagttggacgtgctg
ttcggaaacctcctggaaatgctggaattccaggtggagttcttgaagactctggaagac
gggacccgactggtgccggacctggagaaactggagcgagtggaagagttcaagaaaatc
ctcttttctctgggtggctcgttcctgtattacgccgaccgcttcaagatctacagcgct
ttctgtgccagccacaccaaagtgcccaaagtgctggtcaaagcgaagacagacgcggcc
ttcaaggcgttcctggacgagcgcaaccccaaacagcagcattcgtccacgctggagtcg
ttcctgatcaaacccatccagagagtgctgaaataccctcttctgctgagagaactgcac
tcgctcaccgaccccgacagcgaggagcactaccatctgaacgtggcaatgaaggccatg
aacacggtggccagtcacatcaacgagatgcagaagatccacgaggagtttggagccgtc
tttgacctcctcatctctgaacagactggagaaaagaaagaggttgctgacttgtctatg
ggagatttactcctccacaccagcgtgacatggatcaacccgtcctcctcactggggaag
tgcaagaaagagccacagctggccacatttgtgtttaaaaccgctgttgtgttcatctgt
aaagattattccaagcagaagaagaaaatgggtggttctcatcgagcgtcggtctcaggt
gaggagaaagatccgttccgtttccgccacatgatccccactgatgcgctccaggtgcgc
acactgtccaatacagacggagacaacgcagccgtttgtgagatcatccatgtgaagtct
gaatcagagggaagacccgagagagtgtttcagctctgctgcagctcttcagagagtaag
aaagacttcttgaagatggttcactccatcctgagagataaacagcgccgtcagctgttg
aagacagagagtcttcctccaaatcagcagtatgttccctttggaggaaaacgcctgtgc
gctcttaaaggagcccgacccgccatgaacagagcagtttctgctcccactcgcactctg
ggccggaggaaactggtgcgaaaccgcttcaccatcgacacggacatcgtcttcgacacc
gagccggacagcgactcgccggactcccagcatgctcaggagcagagcgtcatcccggcg
ggcgacaccgaccgctgggtggaggaacagttcgacctccagcgctacgaggagcaggaa
cacgacgtgaaggaaacggacatccttagcgacgacgacgacttctcccagtccgccctg
agcccgtccaccgagccggacctggaggggccgctctctgccctctcgctggagggagac
acagaggaggaagaggacgaggaagcggagaacaagaaggactacaaatcccaccatgcc
aagctctctcatgtagggaagcagtgcgccatgtcagtggccagtgtggatgagcaggcg
ctgcctgatgaggtcatctgggtgcgacgggacagcagcgcagagaacgagacacagagc
tga
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integrated database retrieval system
