Pimephales promelas (fathead minnow): 120483677
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Entry
120483677 CDS
T08155
Symbol
setdb1a
Name
(RefSeq) histone-lysine N-methyltransferase SETDB1-A isoform X1
KO
K11421
[histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase [EC:
2.1.1.366
]
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm00310
Lysine degradation
pprm01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
120483677 (setdb1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pprm03036
]
120483677 (setdb1a)
Enzymes [BR:
pprm01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.366 [histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase
120483677 (setdb1a)
Chromosome and associated proteins [BR:
pprm03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
120483677 (setdb1a)
Heterochromatin formation proteins
Other heterochromatin formation proteins
120483677 (setdb1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SET
Pre-SET
Tudor_5
Tudor_4
MBD
DUF5604
DUF7206
Sigma54_AID
Motif
Other DBs
NCBI-GeneID:
120483677
NCBI-ProteinID:
XP_039534770
LinkDB
All DBs
Position
Unknown
AA seq
1531 aa
AA seq
DB search
MSSGRDDNLLRMTKDDLQRWIQEEVDRNPHLMQRREQLAQVEEWVKLRERDSTYTRLLYS
NACESVLECESVMKGLYGMLGLDYKDEDSEEEGGGEPRQQDVIHIQHDEDRHEISVCNGD
DDDLVVIDLGATKETLEPMVEKVTMAIQKSSRLVQGLVQMVNKTSSAAPPSSSSNRPSSS
STPDNSCSESVTNSRPIKTEPELTAITANEMNISKQHETAPSQNYTSIKLIKTEPQLTAV
SPSEMSSIPSKQPETIISANSGSIAKIKSEPQSTVVKSEMSSPPSNSKLFKIRPSHNSES
IAEMKSEPQLTALTPEIHLFESDSEQSECFNSDRSATIKTEFKLSAMTSPEIPSLSGDSQ
QLKASSGHNSASIASNESDPQATPLTSSEVSSLLSTTEQMDTFASEDTALIETNQTEPES
TSAPSPEGSPLPRILEEPETTPSDDTAFIETNQTEPESTTENSPEVSPLPRNSEEPENDS
ESTDKTEKPTTRSKSGKLGPSINLRSKISTSVTSTSRLQEQTSEPPSPADSFEEPSDSED
PEYLPPNSPIPSDDDPPEPPPSKASTNKPDNTSRNDTSVEPSKAAKSSKPSINDSSGSSK
AHKAPELKLKTPEIKLKTPEVKLKTEEIKLTVSTEVLGKRKPNLWSRGTVQEVQTMEKGN
KYVVEFKHGKQILLSANQVAPVKRPVLTDLFVGCRVVASYKNDAGKTLFNSGVLVELPER
KNRMRFLVFYDGGLAAYLALPDFHVVCKQFKKVWRDIEDETCRAQVKEYMRVFPNPIAVV
LRMGQDTKAVRNGKFEACTVLQLDGSLIQICYKKDKHKEWVYKGSDKLEHIINIKKRLSK
DSPEQTSPKRTQQSPQQKTQQPDKTAGNAVPQHNKTSSSTKVDSPTVTSTTVTSSTTVTS
ATTVTSATDTAVRMTRQSDTTVAKKPSISPQTIMSAAFQPKVILQKLAVLPAFGVSKGRT
RTAKSAMAISTSHLRSEKRPAPDEEEECVSEEERQVSEQDQHKSIYLYHRCCPACLDGVR
PSQVDMHRGENPLLIPLLFKFRRMTARRRIDGKVFFHIFYRSPCGRSLCDMQEVQEYLIE
TRCDFLFLEMFCMDPFVLVNRARPPSTSTSQPHLFLPDISVGREVLPVPCINEVDNTPAP
NVTYTKDRIPAPGVSVNTNLDFLIGCDCTDGCRDRSKCACHQLTIGATSLCSGGPVDVSA
GYTHKRLPTSLPTGVYECNPLCRCDPRMCSNRLVQHGLQLRLELFMTQHKGWGIRCRDDV
AKGTFVCVFTGKIVNEDKVNEDETVSGNDYLANLDFIEGVEKLKEGYESEAYCSDTEVES
NKKTITMKTGPLRKNTLYQEDTSSGEEREEPMELVKEQEEMEVCDESLGARILSHKPHEA
SKDALKKVTKQIREDGKETSGPKRCFAIKSCRRRVKPLETTDTQIEKTRTALSANNTRRL
FNGEETCYIIDARQEGNLGRYINHSCSPNLFVQNVFVDTHDLRFPWVAFFASKRIKAGTE
MTWDYNYEVGSVEGKVLLCCCGSLRCTGRLL
NT seq
4596 nt
NT seq
+upstream
nt +downstream
nt
atgagtagcgggagagatgataacctcctgaggatgacgaaggacgacctgcagcgctgg
atccaagaagaggtggaccgaaaccctcatcttatgcagagacgtgaacagcttgcacag
gtggaggagtgggtgaagctgagggagagagactcaacctacacccgccttctgtacagc
aatgcctgcgagtcagtccttgagtgtgagtcggtgatgaagggtctttatggaatgctg
ggattggactacaaagacgaggactcggaagaggaaggaggaggagaaccgcgacaacag
gacgtcattcatatacaacatgatgaggatagacatgagattagtgtttgtaatggagat
gatgatgatcttgttgtcattgatctgggagctacgaaagaaaccttggaaccaatggtt
gaaaaggtgactatggccattcagaagtcatccagacttgttcagggcttagtccagatg
gtgaacaaaacctcaagcgctgcaccaccatcatcatcatccaacagaccctcatcgagc
tcgacccccgacaacagctgttctgaatcggtcacaaattctagaccaatcaagactgaa
cctgaactgacagcaataacagctaatgaaatgaacatttcaaaacaacacgaaaccgct
cctagtcaaaactacacatccataaaattaatcaagacagaacctcaattgacagcagtg
tctccttcggaaatgtcttcgattccaagcaaacaaccagaaactattatcagtgctaac
tctggatccattgcaaaaataaaatctgagcctcagtcgacagtagtaaagtcagaaatg
tcttcgcctcctagcaattccaaactattcaaaatccggcccagtcataattcagaatcc
attgcagaaatgaagtctgaacctcagctgacagcattaactcctgaaatacatttgttt
gaaagcgattcagaacagtccgagtgtttcaattcagatcgcagtgcaacaattaaaact
gaatttaaattatcagctatgacttctcctgaaatcccttcactttcaggtgattcacaa
caattgaaagctagttccggtcataattcagcatccatagcatcaaatgaatctgatcct
caagcgacaccattgacctcttcagaagtgtcttcgctattaagcactacagaacaaatg
gacacttttgccagtgaagatacagcattaattgaaacaaaccagactgagcctgaatca
acctcagcaccttctcctgaagggtcaccgttgccgaggattttagaagaacctgaaacc
actccaagtgatgatacagctttcattgaaaccaaccagactgagcctgagtcgaccaca
gagaattctcctgaagtgtcaccgttgccgaggaattcagaagaacctgagaatgattca
gaatccacggacaagacggaaaagccaacaacgaggagcaaatctggtaaactaggtcca
tcaatcaatctgagatcaaaaatctctacatccgtcaccagcacttccaggctgcaagaa
cagacaagtgaaccaccatcacctgcagatagttttgaggaaccgtctgactcagaggac
ccagagtacctgccgcctaatagtcctatacccagtgatgatgatccccctgaacccccc
ccctccaaggcatcgaccaataaacctgataatacctcccgcaacgatacttctgtggaa
ccttccaaagctgcaaaaagttccaagccttcaataaacgattcctctgggtcttctaaa
gcacataaagctccagagctaaagctcaaaactccagagataaagctcaaaactccagag
gtaaagctcaaaactgaggagataaagctcactgttagcacggaagttttggggaaaagg
aaacccaatttgtggtctcgaggaacagtacaagaagttcaaacgatggagaagggcaac
aaatatgtggtggagtttaagcatgggaaacagattctgctgtctgctaatcaagtggcc
cctgtaaagcgtcctgtgctcaccgatttgtttgttggctgtcgtgttgtggcaagctac
aaaaatgatgcaggaaagaccttgtttaattctggtgtgttggttgagcttcctgagcgc
aagaatcgcatgaggttcttagtgttttatgatggtggcttggcagcgtatctggcactg
ccggactttcatgttgtctgcaaacaatttaaaaaggtgtggagggatattgaggatgag
acatgtcgggcgcaggtgaaggaatatatgcgtgtctttcccaaccccattgctgtggtg
cttcgcatggggcaagacacgaaggcggtgcgaaatggcaagtttgaggcctgcacggtg
cttcagttggatggcagcctgatccagatctgctataagaaagacaagcacaaggagtgg
gtttataaaggctcggacaagttggaacacattataaatatcaagaaacgtctttctaaa
gacagtccagaacaaacctctccaaagagaacacaacaatcgcctcaacagaaaactcaa
caaccggataaaaccgcaggaaatgccgtgcctcagcacaacaaaacttcctcctcgaca
aaagtggactcaccgacagttacatcaacgactgttacctcatcaacgactgttacctca
gcaacgactgttacctcagcaactgacactgctgtacgcatgacccgacaatctgatacc
acagtcgccaaaaaaccatctatctcccctcaaactatcatgtcggcagctttccagccg
aaggtcatcctccagaagttggccgtcttaccagctttcggtgtgtcgaagggtagaacg
cgaacagcaaaatctgctatggcaatcagtacttcacatttaagaagtgaaaaacgaccc
gcccctgatgaggaagaagaatgtgtttctgaggaagagaggcaagtctcagagcaagac
cagcacaagtccatatacttgtatcaccgctgttgtccagcatgtctggatggggtaaga
ccatctcaggtcgacatgcatcgtggtgaaaatccgcttcttatcccattgctttttaag
tttcggcgaatgactgctcggaggcgcattgatggaaaggtgtttttccacattttctat
cgttctccatgtgggcggagcctatgtgatatgcaggaagtgcaagaatacttgattgaa
acgcgttgtgacttcctcttcctggaaatgttctgtatggacccgtttgtgcttgtgaat
cgtgcccgacccccttccacatcaaccagccagcctcacctcttcctgccggacatctct
gtgggtagggaggtgttacctgtgccctgtattaatgaagtggacaatactcctgctcct
aatgtcacttacacaaaagacagaattccagctccaggtgtttccgtcaatacaaacttg
gacttcttgatcggctgtgactgcacggatggctgtcgggacaggtcaaaatgtgcatgc
caccagctgaccattggggccacgtccttatgcagtggcggtccagtagatgttagtgct
ggatacacacataagaggctaccaacaagcttgccaacaggggtgtacgagtgtaaccct
ctgtgccgttgtgacccgagaatgtgcagcaacaggctggttcagcacggtctacagctg
cggctggagctattcatgacacagcacaagggatggggcatccgctgcagagatgatgtg
gccaagggcacgtttgtctgtgttttcactggtaaaatagtgaacgaagacaaagtgaat
gaagatgagacggtgtccggcaatgactatttggccaaccttgacttcattgagggagtg
gagaaattgaaagagggttatgagagcgaggcgtactgctcggacacagaggtcgaaagc
aacaagaagactataaccatgaaaacagggccgttgcggaaaaatactctctaccaagaa
gacactagcagtggcgaagaaagagaagaacctatggagctggtcaaagaacaagaggaa
atggaagtctgtgatgagtccttaggcgcgagaatactatcccataagccacatgaagca
tctaaagatgctctgaagaaagtgaccaaacaaataagagaggacggtaaagagacctct
ggtccaaagcgttgctttgccataaagtcctgcaggagaagagtaaaaccattagaaacc
actgacacacaaattgagaaaactaggacagctctgtctgccaacaacacccgcagactg
ttcaatggcgaggagacctgttacattattgacgcgagacaagagggcaacctcggccgc
tacatcaatcatagctgcagtccaaatttgtttgtccagaacgtctttgtggacactcat
gacctccggttcccatgggtggcgttctttgccagcaagcgcatcaaggcaggtacggag
atgacgtgggattataactatgaggtgggcagtgtggaggggaaggttctgctctgctgc
tgtggctcattgcggtgcactggaagactgctctga
DBGET
integrated database retrieval system
