Pimephales promelas (fathead minnow): 120484108
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Entry
120484108 CDS
T08155
Symbol
vdra
Name
(RefSeq) vitamin D3 receptor A isoform X1
KO
K08539
vitamin D3 receptor
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pprm01009
]
120484108 (vdra)
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pprm03000
]
120484108 (vdra)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
pprm03310
]
120484108 (vdra)
Protein phosphatases and associated proteins [BR:
pprm01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
120484108 (vdra)
Transcription factors [BR:
pprm03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
120484108 (vdra)
Nuclear receptors [BR:
pprm03310
]
1. Thyroid hormone like
1I. Vitamin D3 like receptor
120484108 (vdra)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
PCF11_charged
ArsA_ATPase
Motif
Other DBs
NCBI-GeneID:
120484108
NCBI-ProteinID:
XP_039535062
LinkDB
All DBs
Position
Unknown
AA seq
419 aa
AA seq
DB search
MDAMAVSTSAAGPDEFDRNAPRICGVCGDKASGFHFNAMTCEGCKGFFRRSMKRKASFTC
PFSGNCSITKDNRRHCQACRLKRCVDIGMMKEFILTDEEVQRKKDLILKRKEEEAAREAR
KPRLSEEQRQIINTLMEAHHKTYDDSYSDFVRFRPPVREGPITRSASRAASLHSLSDASS
DSFNHSPESVDTKLNFSNLLMMYQDSSPDSSEEDSSRLSMLPHLADLVSYSIQKVIGFAK
MIPGFRDLTAEDQIALLKSSAIEIIMLRSNQSFSLEDMSWSCGGPDFKYCVNDVTKAGHT
VELLEPLVKFQVGLKKLNMHEEEHVLLMAICLLSPDRPGVQDHVRIEALQDRLCDVLQAY
IRIHHSGGRLVYAKMIQKLADLRSLNEEHSKQYRSLSFQPEHSMQLTPLVLEVFGGEVS
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atggatgccatggccgtgagcacgtcagcggcgggtcccgatgagttcgaccgcaacgcg
ccgcgcatctgtggagtgtgtggagacaaagcctccggtttccacttcaacgccatgacc
tgcgagggctgcaagggcttcttcaggcgcagtatgaagcgcaaggccagctttacctgc
ccgttcagtggaaactgctccatcaccaaagacaaccggcgtcactgccaggcctgtcgt
ctgaagcgctgcgtcgacatcggcatgatgaaggagttcatcctgacggacgaggaggtg
cagaggaagaaggatctgatcctgaagcggaaggaggaggaggcggcgcgtgaggcgagg
aaacctcgtctgagtgaagaacagaggcagatcatcaacacactgatggaggcgcaccac
aagacctacgacgactcctactccgacttcgtgcgcttcaggcctccggtccgtgagggt
cccatcactcgcagcgccagtcgagccgcgtctctacactctctgtctgacgcctcatca
gattcattcaaccattcaccagagtctgtggacacgaagctgaacttcagtaatctgctg
atgatgtatcaggacagcagccccgactccagcgaggaggacagctctcggctctccatg
ttgccgcacctcgcggatctcgtcagctacagcatccagaaggtcatcggattcgccaag
atgatcccggggttcagggacctgacggcagaagatcagatcgctctgctcaagtccagt
gccatcgagatcatcatgttgaggtcgaaccagtcgttcagtctggaggacatgagctgg
agctgcggaggaccggacttcaaatactgcgtcaatgacgtcaccaaggcgggtcacaca
gtggagctgctggagccgctggtcaagtttcaagtgggtctgaagaagctgaacatgcat
gaggaggagcatgtgctgctgatggccatatgtctgctgtctccagatcgcccgggcgtt
caggaccacgtgcgcatcgaagcgctccaggaccgcttgtgtgacgttctccaggcgtac
atccgcatccatcactcgggcgggagactcgtctacgcgaagatgatccagaagctggcg
gacctgcgcagcctgaacgaggagcactcgaagcagtaccgctcgctgtccttccagccc
gagcacagcatgcagctcacgcccctggtgctcgaggtgttcggcggcgaggtgtcctag
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