Pimephales promelas (fathead minnow): 120484392
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Entry
120484392 CDS
T08155
Symbol
setdb1b
Name
(RefSeq) histone-lysine N-methyltransferase SETDB1-B
KO
K11421
[histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase [EC:
2.1.1.366
]
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm00310
Lysine degradation
pprm01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
120484392 (setdb1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pprm03036
]
120484392 (setdb1b)
Enzymes [BR:
pprm01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.366 [histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase
120484392 (setdb1b)
Chromosome and associated proteins [BR:
pprm03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
120484392 (setdb1b)
Heterochromatin formation proteins
Other heterochromatin formation proteins
120484392 (setdb1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tudor_4
DUF5604
Tudor_5
SET
Pre-SET
MBD
Chromo_MORC2_6th
ODAD1_CC
DUF4537
PcrA_UvrD_tudor
Motif
Other DBs
NCBI-GeneID:
120484392
NCBI-ProteinID:
XP_039535459
LinkDB
All DBs
Position
Unknown
AA seq
1217 aa
AA seq
DB search
MEVDASLSSEMELDPELEEELGVSLDELRKWIEEQVDGSEAVRQRKNQLEQLQEWVEKRE
KEVSEMDTLCSNASESVVQCEALVKDVYSKMGLVYRESSSEDEGVGGANTSEVIEIDDDD
DDDVIAVGCVVPPKKVVTPAKDPALKEASAALQRTSQQVQNLAQTVNRTAPSGLTPSAKA
PSTQTHGALAVPAVFMSSGPRNAPTQPNPNIKQDNIKLDMTLLGKKRTKTWHRGTLVAIK
QVGNNFKYKVKFENKGKSLLSGNHVAFDYHPTLERLFVGARVVARYKDGNQVWLYAGVVA
EMPNSKNRMRFLIFFDDGYASYVGLPELYPICRPLKKTWEDIEDASCKDFIEEYITSYPN
RPMVLLKPGQIIKTEWEGTWWKSRVEEVDGSLVKMLFLDDKRSEWIYRGSTRLEPMFNLK
MNTANSQEKKMAGQQRQRPNMGALRTKGPVVQYTSGDNSTSGTSRPIAPQLPPPRPLPTG
PPQPSRTESPSLKSQMAKKSTGPVAMQPRQGVTPDLQPKTLIGTVQQHNTSRLFLLQSGP
VHTLTPITSTTHNLQTTVSTYTSERIPQEPSYQAPNDRLFYLTHNCSPDCLKRIRPTHHN
LHRGRNPLLTPLLYEFRRMTGRRRLNRKMSFHVIYKSPCGLSLRNMAEIQRYLFQTHCDF
IFLEMFCLDPYVLVDRRFQPQRPFYFIRDITGGREDIPLSCVNEIDSTSAPSVAYSKERI
PADGVYINTSSDFLVGCDCTDGCRDKSKCSCHQLTLQATGCTPGGQINPNAGYHHKRLEE
CLPTGIYECNKRCRCNAQMCTNRLVQHGLQVRLQLFKTQNKGWGIRCLDDIAKGSFVCIY
AGKILTDDFADKEGLEMGDEYFANLDHIESVENFKEGYESEAHCSDSEGSGVDMSRVKLP
ASSQHGKSTTKMEERNSSTTGKSQDDSSEDSDDDKDEDSNDESDSSDDTFVKDTYYTTSS
VWRSYTTRRQAKGMKEESQDSKDGLSVSAGEERKPPPMPEETGKSKVASWLTNQSSTSAN
PSVKVEGAVKTEKKDVMTLSDSDDVQTISSGSDDNKEREKKTQAVVKRQVAVKSTRGIAL
KSHGMMVKTGGGGAGGGGSGPTRGSGPSHGLGGGGGEGGHRNTRLFFDGEESCYIIDAKL
EGNLGRYLNHSCSPNLFVQNVFVDTHDLRFPWVAFFASKRIRAGTELTWDYNYEVGSVEG
KELLCCCGSTECRGRLL
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atggaggtggatgccagtttgagctcagagatggagttggatcctgagttggaggaggag
ttaggggtgtctttggacgagctgcgcaagtggatcgaggagcaggtggatggcagtgaa
gccgtgcggcagaggaaaaatcagctggagcagctgcaggaatgggttgagaagagggag
aaggaggtctctgaaatggacactctttgctctaatgcctcagagtctgtggttcagtgt
gaagctctagtgaaggacgtgtacagtaagatgggtctagtgtatcgtgagagcagttcg
gaggatgagggtgtaggtggggcaaatacttctgaggtcattgagattgacgacgatgat
gacgatgatgtcattgctgtaggatgtgtggttcctcccaagaaggttgtaactccagcc
aaggacccagcattgaaggaggcttcagctgcccttcaaagaacatctcagcaggtgcag
aacctggcccagacggtcaacagaacagccccatcgggtttaaccccttctgctaaagcc
ccctccacacaaacccatggtgctctggctgttccagctgtgtttatgtcttcaggccca
aggaatgcgcccactcaaccgaaccctaatattaaacaggataacatcaagctcgacatg
acacttttgggtaaaaaacgaaccaagacgtggcatcggggaacacttgttgccatcaaa
caagtgggaaacaattttaagtacaaggtgaagtttgaaaataaagggaagagtcttctc
tctggtaaccatgtggcatttgactaccacccaacactggaaagactgtttgttggtgcc
cgtgttgttgccaggtacaaggatggcaatcaagtctggctctatgcaggcgttgtcgct
gagatgcccaacagtaagaaccgtatgaggttcctgatcttttttgatgatggttatgcc
tcatatgtgggccttcctgagctctatcccatctgtagacctttgaaaaagacgtgggag
gatattgaggatgcatcatgcaaagatttcattgaggagtatatcacatcatatcccaac
aggcccatggtgttgctgaagccagggcaaattattaagacggaatgggaggggacatgg
tggaaaagccgtgtggaagaagtggatggcagccttgtcaaaatgcttttcctggatgat
aagcggagtgagtggatttatcgtggctctacacgactagaaccgatgtttaatctgaaa
atgaacaccgctaacagtcaagagaagaaaatggctggtcaacaaagacagcggcctaat
atgggagcattaaggacaaagggtcctgtagtgcagtatactagtggtgacaacagtact
tctggtaccagtcggcctatagccccacagctcccaccacctcggccactgccgaccgga
cccccacagccttcccgcacagagagtcccagtttaaagagtcaaatggctaagaagagc
actggtccagttgcaatgcagcctcgtcagggcgtgacccctgacctccagcccaaaaca
ctaattggcactgttcagcaacacaatacctccaggctctttcttctgcagtctggacct
gtgcatacgttaacgccaatcacatcaacaactcataatttacagacaaccgtgtcgacc
tacacaagtgagcgtattcctcaggagccgtcgtatcaggccccaaatgaccgactcttc
taccttacacacaactgcagtccagactgtctaaagcgcatccggcccactcatcacaac
ttgcaccgaggacgcaacccgcttcttaccccattgctctatgaattccggcgcatgaca
ggccgtagacgacttaaccgcaagatgtcgttccacgtcatctacaagtccccctgtggc
ttgagtctgaggaatatggcagagatccagcgctacctcttccagacacactgtgacttc
atcttcttggagatgttctgtctggatccatatgtgttggttgaccgccgattccaaccg
cagaggccgttctacttcatccgggacatcacaggtggccgcgaagacattcccttgtcc
tgtgtgaatgaaatcgacagcacatctgcacccagtgtggcctacagtaaagagagaatc
ccagcagatggagtctatattaacaccagctcagacttcctggtgggctgtgactgcact
gatggctgcagagacaaatccaagtgttcgtgtcaccagctgactctacaggctacagga
tgtactccaggtggacagatcaaccccaacgctgggtatcatcacaagagactggaagaa
tgtctccccacaggaatctatgaatgtaataagcggtgtcgctgtaatgcccagatgtgt
actaatcgtctggttcagcacggtttgcaggtccgactgcagctctttaagacccagaat
aagggctggggcattcgttgccttgatgacattgccaagggctcctttgtttgtatctat
gcaggtaaaatcctgactgatgactttgccgataaagaaggtttggaaatgggcgatgaa
tactttgccaatctagatcacattgagagtgtggagaactttaaagaaggttacgagagt
gaggctcattgctccgacagcgagggcagcggggtggacatgagcagggttaaactacct
gcttcctcccaacacggtaaatccaccaccaagatggaggagcgtaacagcagcactacc
ggcaaaagccaagacgattcatctgaagacagcgacgatgacaaagatgaagactctaat
gatgaaagcgacagttcagatgacacatttgtgaaagacacttattacaccaccagctca
gtgtggaggagctacaccacccgcagacaagccaagggaatgaaggaagagagtcaggac
agtaaggatgggctgagtgtttctgcaggcgaggagaggaagccccctcccatgccagag
gagaccgggaagagtaaagtagcatcttggctcaccaatcaatcctccacttctgcgaat
ccgagtgtcaaggtggagggagcggttaagacagagaagaaggatgtgatgaccctctct
gacagtgatgatgtgcaaacgatcagctcaggatcagatgacaacaaggagagagagaaa
aagactcaggcggtggtgaagaggcaggtggcggtgaagtccactcgtggcattgctttg
aagtcccacggtatgatggtgaaaacggggggagggggtgcaggaggaggtgggtcaggc
ccaactcgtgggtcaggcccgtctcatggactgggaggtggcgggggtgaaggtggccat
agaaacacccgcctgttctttgacggggaggaatcctgttacatcatcgatgccaaactg
gaaggcaacctcggacgctacctcaatcatagctgcagccctaatctgttcgtccagaac
gtgtttgtggacactcatgatctacgcttcccctgggtggccttctttgctagcaagcga
atccgagcagggacggagctgacatgggattataattatgaagttggcagtgtagagggc
aaggagcttctgtgctgctgtggatctacagaatgcagaggacgactgctgtaa
DBGET
integrated database retrieval system
